Transcript Information: S_Transcript_60813.p1


Annotated TAIR IDAT1G11240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3766936-3768212 | Reverse length=200
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9959750926385
Replicate 22.2062789557515
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 14.7982128213549
Replicate 22.5168329719692
Replicate 33.4638252358095
Condition 3: 24 Hour
Replicate 11.911427305427
Replicate 20.84989293411303
Replicate 33.7833066607674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60813.p1 GENE.S_Transcript_60813~~S_Transcript_60813.p1 ORF type:complete len:80 (+),score=27.46,Nop25|PF09805.5|1.9e-11 S_Transcript_60813:244-483(+)
ATGGAAGCAGATTCCGAAGCCGCCGTAGTGGGTCAGCCAAGCGCAAACCACATCAAGAAGAGGTCTCTTAGTAACAAAGCTCTTTCCATCTATTTCAACGAGAAAGATTTGAAGGACTATGTGGATGGTTTCCACAAGAGGAAGAAGAAGAGGAGAAAGGAAGCCCAGAAGCAGCAAGAAGAAGCAGAACGACGTAGGCGTCTAGAAGAGTGTAAAAGGGTTTCATCTGGAGGTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60813.p1 GENE.S_Transcript_60813~~S_Transcript_60813.p1 ORF type:complete len:80 (+),score=27.46,Nop25|PF09805.5|1.9e-11 S_Transcript_60813:244-483(+)
MEADSEAAVVGQPSANHIKKRSLSNKALSIYFNEKDLKDYVDGFHKRKKKRRKEAQKQQEEAERRRRLEECKRVSSGGG*

Click here to download the sequence:
Link to NCBI Protein BLAST