Transcript Information: S_Transcript_60814.p1


Annotated TAIR IDAT1G11240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3766936-3768212 | Reverse length=200
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4022917342886
Replicate 25.5522251866594
Replicate 35.8625916027339
Condition 2: 8 Hour
Replicate 17.3438430231186
Replicate 25.7781595824459
Replicate 36.0700758080411
Condition 3: 24 Hour
Replicate 17.5227413345093
Replicate 25.4032928261491
Replicate 35.1780356063483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60814.p1 GENE.S_Transcript_60814~~S_Transcript_60814.p1 ORF type:3prime_partial len:151 (+),score=53.67,Nop25|PF09805.5|5.4e-12 S_Transcript_60814:244-693(+)
ATGGAAGCAGATTCCGAAGCCGCCGTAGTGGGTCAGCCAAGCGCAAACCACATCAAGAAGAGGTCTCTTAGTAACAAAGCTCTTTCCATCTATTTCAACGAGAAAGATTTGAAGGACTATGTGGATGGTTTCCACAAGAGGAAGAAGAAGAGGAGAAAGGAAGCCCAGAAGCAGCAAGAAGAAGCAGAACGACGTAGGCGTCTAGAAGAGTGTAAAAGGAGGAGATTGGAAAAAGAGTATGCATTAAATGGTGGTGCTCCACCTGCAAATGATGCTGAACCCAATGGTGAGGATGTGGAGGAGGAGATTCTCAAACCATCGATTTCTGGGAGAACAACCTATGAAAATGGCGATGTTATGGTCACCGTTACTACAAGTGAGATCACTGCTGAAGAAGTGGATCATCCAAGTGAAAAGTCAGCACCATTACTGCCGGTGTCAAATGGAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60814.p1 GENE.S_Transcript_60814~~S_Transcript_60814.p1 ORF type:3prime_partial len:151 (+),score=53.67,Nop25|PF09805.5|5.4e-12 S_Transcript_60814:244-693(+)
MEADSEAAVVGQPSANHIKKRSLSNKALSIYFNEKDLKDYVDGFHKRKKKRRKEAQKQQEEAERRRRLEECKRRRLEKEYALNGGAPPANDAEPNGEDVEEEILKPSISGRTTYENGDVMVTVTTSEITAEEVDHPSEKSAPLLPVSNGE

Click here to download the sequence:
Link to NCBI Protein BLAST