Transcript Information: S_Transcript_60919.p1


Annotated TAIR IDAT4G11910.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7156435-7157839 | Forward length=271
E-Value1.9E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.428188726603
Replicate 244.66182747233
Replicate 331.122117141076
Condition 2: 8 Hour
Replicate 124.509389565872
Replicate 225.40136980969
Replicate 323.684275116646
Condition 3: 24 Hour
Replicate 146.572077997308
Replicate 234.703961476282
Replicate 332.315744394055


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60919.p1 GENE.S_Transcript_60919~~S_Transcript_60919.p1 ORF type:complete len:288 (+),score=66.22,Staygreen|PF12638.3|1.9e-59 S_Transcript_60919:338-1201(+)
ATGGCCACTTTGACTGCATCTATGTTGCTGCCATCAAAGCTGAAACCTTCTTCAGTTTTGGAAGATTCAAGATCATCATGTAGAGGTCTACCCAAGTTCAAGAGGAATCATTCTTGTTCTCCTGTGATGAGATTGTTTGGGCCAGCAATATTTGAAGCATCAAAGTTGAAGGTGTTGTTCTTGGGAGTGGATGAAGAGAAACACCCAGCAAAGTTGCCCAGAACTTATACTTTAACTCATAGTGATATCACTTCCAAACTTACTCTGGCCATCTCTCAAACTATTAATAACTCCCAGTTACAAGGGTGGTATAATAAACTACAGAGAGATGAGGTGGTGGCAGAATGGAAGAAAGTGAAGGGGAAAATGTCTCTTCATGTTCATTGTCACATAAGTGGTGGTCATTTCCTCTTAGACTTGTGTGCTAGGCTCAGATACTACATCTTTTGCAAGGAGCTTCCTGTGGTAATGAAGGCATTTGTACATGGAGATGAAAATTTGTTCAACAACCACCCGGAACTACAGGAGGCATTGGTGTGGGTGTATTTTCATTCAAACCTACCAGAATTCAACAAAGTCGAGTGCTGGGGCCCTCTCAAGGATGCTGTTTCTCGGAACTTGAAAAAAAATAAGCTAGATTATGATCTTAATAATCTTACTTGTAGTGAAGAACAAGCCAAAGATGAGTCATTGATAAGTATCCCAAATTTGGAGATGCCACAGCCTTGCAAGCAACCTTGTACCTGTTGCTTTCCTTCTCCTAGTGTCATCCCTTGGTCTCAATCCTTGTCACAACTGGAGCTCCGTGATGATCTCTCCGGTGACAGGGCCCGCCACCAAGGCTTGAAGCAACAGCAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60919.p1 GENE.S_Transcript_60919~~S_Transcript_60919.p1 ORF type:complete len:288 (+),score=66.22,Staygreen|PF12638.3|1.9e-59 S_Transcript_60919:338-1201(+)
MATLTASMLLPSKLKPSSVLEDSRSSCRGLPKFKRNHSCSPVMRLFGPAIFEASKLKVLFLGVDEEKHPAKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLCARLRYYIFCKELPVVMKAFVHGDENLFNNHPELQEALVWVYFHSNLPEFNKVECWGPLKDAVSRNLKKNKLDYDLNNLTCSEEQAKDESLISIPNLEMPQPCKQPCTCCFPSPSVIPWSQSLSQLELRDDLSGDRARHQGLKQQQS*

Click here to download the sequence:
Link to NCBI Protein BLAST