Transcript Information: S_Transcript_60946.p1


Annotated TAIR IDAT2G41620.1
Annotated Gene NameNucleoporin interacting component (Nup93/Nic96-like) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17350419-17354997 | Reverse length=861
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.608112636433
Replicate 210.65184623476
Replicate 310.869137469913
Condition 2: 8 Hour
Replicate 119.810601215805
Replicate 216.263663550523
Replicate 316.158406120091
Condition 3: 24 Hour
Replicate 18.3160877217245
Replicate 27.7977598098421
Replicate 38.8459112453015


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60946.p1 GENE.S_Transcript_60946~~S_Transcript_60946.p1 ORF type:complete len:901 (+),score=204.46,Nic96|PF04097.10|5.4e-104 S_Transcript_60946:112-2703(+)
ATGGCGAAAGAAGCAGACATGAGTGGATGGACGGACCTTCTCCACTCTTCTACAAAGCTTCTCGAACAAGCTGCTCCTTCTGCTCAGTTCCCTCCTTTACAGAGGAATTTGGAGCAATTGGAAGCGTTGTCAAAGAAGCTCAAGGCTAAAACCCTAAGGACCGAAGCTCCTTCTCAATCTATTGCCGCCACCAGGTTGCTTGCTCGTGAAGGGATCAATGCAGAGCAACTTGCAAGAGATCTGAAATCTTTTGAACTAAAGACTACATATGAGGATGTTTTCCCAGCTGAGGCAACTACGGTGGAAGATTATCTGCAACAGGTACATGAGATGGCAATGCTATCAGCTATCCAGGAAGCTCAGAAAGATAATCTGAGAAATTTCAATGACTACACGATGAAGGTTTTGGAGGATGATTGGCAAAAGGAGAAAAGGGATTTTCTTCAGAGCTTGAGCCGGATTTCAACATTACCCCGAACTAATACTGGTGAAACAGCTAGTGCCATTACTCGTCCTGGTCAAATCGTATCAGTGGCTTCTACTCCTCAGGCCTTTAGTGGCCCCTCTAGTATGGAGATTGTACCGCATGCTACTAAGCCCATCCAGGAGAAAAAAGCTTCTGCCTATGCTGAGGTTGTCAAAATTCTCAATAATGCAAGGGAACGAGCTTCACCATTCAAACCTGCTACAGCTTTCAAGGCTGCTTTTGAAAGTTTGGGTGTTGAGACATCTGGCGCAAAATCAGTTGGCATGCAGAAGATATGGAACCTTGTTCAGACATTGGTGGGTGAAGATTTAAGCATTCAGCAGAATGTGTCGACGAAAATGTCATTGGTGAACGGAGCAAGGCGACATCTAGAGTGGGGACATGCAAAACATGTTGTTGAAACAATTCAAAATCATCCCGTACAGGCTGCTCTTGGTGGCTCTGTTGGTAATCTTCAAAGAATACGTGCTTTTCTACGAATCCGTTTAAGAGATCACGGAGTTTTAGATTTTGATGCTGTTGATGCTAGGAGGCAACCTCCATTGGATACAACTTGGCAACAGATGTACTTCTGTTTGAGAAGTGGATATTATGACGAAGCAAGGAGTGTAGCTCAGTCATCTCGGGCTTCGCTACATTTTGCTCCACAGATTTCAGAATGGATAGCTACTGGAGGTTTAGTCTCTGCAAATACAGCTTCTGCTGCTGCGGAAGAATGTGAGAAAATGTTCAGAATGGGCGATCGTGGGGCTCGAGCAGTCTATGACAGAAAGAAACTCGTACTTTATGCTATTGTTTCTGGTTCTCGCAGGCAGATAGACCGCTTGCTTAGGGAGTTCCCAAATCTTTTTAATACCATAGAGGACTTCTTATGGTTCCAACTGTGTGCCATACGTGACAGTCCTCGTGGATCCTCATCTTCTATTCTCAATGAGGGATCAGCACCTTACACTTTGGAGGATCTACAGACGTATCTGAACAAGTTTGAGCCATCTTACTACACTAAGGGTGGCAAGGACCCTCTCATGTACACTTATGTTTTGCTTCTGAGCATTCAGTTGCTGCCAGCTGTCATGCACTTGTCGAAGGAGATGGGTGATGAAGGGTTCAACATTGATGCTGTCCATATAGCAATGACATTCGCTGATCATGGGGTCCTTTCAGAAGGTGCTGCTTCAGGGCAGAAGCTGGCAGTGATGGATGCTTTTGCTGAAGTATCCAGTATGATTAGGCAGTATGGCTCAGCATACTTACGAGTTGGAAATCTTTCCATGGCATTGGAATACTATGCACAATCAGCTGTTGCTGTTGGAGGTGGCCAGTTATCATGGGTAGGGAGGGGTAGCTTAGATCAGCAAAGGCAGAGGAGCTTAATGCTGAAACAGCTTCTTACTGAGTTGTTGCTACATGATAATGGACTTTATCTCCTGCTTGGACCAAGAGGCGCCGGAGAAGAAGCTGAGTTGAGGCGGTTTTTTACCGATGCTGCAACAAGACGACAGTTTTTGCTTGAAGCAGCTTTCCGGTGTCAAGAAACTGGGTTATATGACAAATCGATAGAGATTCAGAAGAGGATTGGTGCTTTTGGGATGGCTTTGGACACAATTAATAAGTGCCTGTCAGAAGCAATATGTTCCTTGTCACGGGGCAGACTGGATGGCGATAGCCGAACAGCTTCTCTGATTCATTCCGGCAATGAGATACTAGAGATGTGCAAATATTATACTGAGATCAGTGTGAAAGAGAGGGAACATGTTTTGGAACAAGAAATAGTCTTGAGGCAGCTCGAGGCAATATTGTCAATTCATGAGCATGCGAGACAGGGTCGCCATATGGATGCTTTGCGGGAGATTGCCAAGCTGCCTTTCCTTCCATTGGATCCACGTTCACCAGATTTGACAATGGATTCATTCCAGAATTTGTCTCCCCATGTTCAGGCTTGTGTCCCGGACGTGCTCAGAGTTGCCTTAAGTTGTCTAGAGAACGTGACAGATACAGATGGATCTCTTCGTGCTTTGAGAACAAAGATTGCAAATTTCCTTGCAAACAATTTGCACAGAAATTGGCCACGTGATTTGTATGAAAAGGTTGCGCGAAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60946.p1 GENE.S_Transcript_60946~~S_Transcript_60946.p1 ORF type:complete len:901 (+),score=204.46,Nic96|PF04097.10|5.4e-104 S_Transcript_60946:112-2703(+)
MAKEADMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLEQLEALSKKLKAKTLRTEAPSQSIAATRLLAREGINAEQLARDLKSFELKTTYEDVFPAEATTVEDYLQQVHEMAMLSAIQEAQKDNLRNFNDYTMKVLEDDWQKEKRDFLQSLSRISTLPRTNTGETASAITRPGQIVSVASTPQAFSGPSSMEIVPHATKPIQEKKASAYAEVVKILNNARERASPFKPATAFKAAFESLGVETSGAKSVGMQKIWNLVQTLVGEDLSIQQNVSTKMSLVNGARRHLEWGHAKHVVETIQNHPVQAALGGSVGNLQRIRAFLRIRLRDHGVLDFDAVDARRQPPLDTTWQQMYFCLRSGYYDEARSVAQSSRASLHFAPQISEWIATGGLVSANTASAAAEECEKMFRMGDRGARAVYDRKKLVLYAIVSGSRRQIDRLLREFPNLFNTIEDFLWFQLCAIRDSPRGSSSSILNEGSAPYTLEDLQTYLNKFEPSYYTKGGKDPLMYTYVLLLSIQLLPAVMHLSKEMGDEGFNIDAVHIAMTFADHGVLSEGAASGQKLAVMDAFAEVSSMIRQYGSAYLRVGNLSMALEYYAQSAVAVGGGQLSWVGRGSLDQQRQRSLMLKQLLTELLLHDNGLYLLLGPRGAGEEAELRRFFTDAATRRQFLLEAAFRCQETGLYDKSIEIQKRIGAFGMALDTINKCLSEAICSLSRGRLDGDSRTASLIHSGNEILEMCKYYTEISVKEREHVLEQEIVLRQLEAILSIHEHARQGRHMDALREIAKLPFLPLDPRSPDLTMDSFQNLSPHVQACVPDVLRVALSCLENVTDTDGSLRALRTKIANFLANNLHRNWPRDLYEKVARSL*

Click here to download the sequence:
Link to NCBI Protein BLAST