Transcript Information: S_Transcript_61008.p1


Annotated TAIR IDAT2G15790.1
Annotated Gene Namepeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase
Annotated Gene Symbol(s)SQN, CYP40
Annotation TypeOrtholog
Chromosome Positionchr2:6878144-6880743 | Reverse length=361
E-Value9.4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.580720955206
Replicate 214.12018531681
Replicate 318.31978450971
Condition 2: 8 Hour
Replicate 125.163960574217
Replicate 231.469733753215
Replicate 331.263243153973
Condition 3: 24 Hour
Replicate 113.835092877376
Replicate 217.3755888752
Replicate 330.098306323438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61008.p1 GENE.S_Transcript_61008~~S_Transcript_61008.p1 ORF type:complete len:150 (+),score=16.04,Pro_isomerase|PF00160.17|4.1e-06 S_Transcript_61008:215-664(+)
ATGGCTTGCTCTGCCATGATTAACATTCAGGCGGTCTCGTCTCGCTTCCTCCTGGTCCAGGGTAGCTTCTGCAATAAGCTTTGCAATGTTCAACAATCGCAAGCAATTTCTGGCACTGCTGGTTTGCATCCGAGTCACTCTCGCTCTAACTTGGCAGGCAGGCTAACATCAAGATCTCATTATGGATCAAACGTGTTTAAACTTAATTCCAAGGCACCCTCAGTTTCACGTCTGGCTGCATTCTGTGTCAAAGCCTCTTCTACTGGTCAAGAGTTGCAAGCAAAAGTGACAAAAAAATGCTTCTTTGACATAGAAATCGGTAGGGAGCCTGCAGGTAGAATTGTGATTGGCTTATTTGGCGATGTTGTTCCAAAAACTGCTGAGAATTTTCGTGCCCTATGCACAGGTAATGTTTTTCTTAGTCAATTCATTGTTAAGCTGCTATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61008.p1 GENE.S_Transcript_61008~~S_Transcript_61008.p1 ORF type:complete len:150 (+),score=16.04,Pro_isomerase|PF00160.17|4.1e-06 S_Transcript_61008:215-664(+)
MACSAMINIQAVSSRFLLVQGSFCNKLCNVQQSQAISGTAGLHPSHSRSNLAGRLTSRSHYGSNVFKLNSKAPSVSRLAAFCVKASSTGQELQAKVTKKCFFDIEIGREPAGRIVIGLFGDVVPKTAENFRALCTGNVFLSQFIVKLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST