Transcript Information: S_Transcript_61042.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value2.4E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.463750260691
Replicate 216.646346362804
Replicate 315.242518382719
Condition 2: 8 Hour
Replicate 133.002274989496
Replicate 230.567191650423
Replicate 330.658654845725
Condition 3: 24 Hour
Replicate 118.138553643861
Replicate 218.00287346296
Replicate 318.478875720972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61042.p1 GENE.S_Transcript_61042~~S_Transcript_61042.p1 ORF type:complete len:778 (+),score=129.73,Ank_2|PF12796.3|0.0019,Ank_2|PF12796.3|3.4e-07,Ank_2|PF12796.3|0.0048,Ank_2|PF12796.3|9.2e-06,Ank_2|PF12796.3|7.8e-06,Ank_2|PF12796.3|6.8e-08,Ank_2|PF12796.3|2.3e-08,Ank_5|PF13857.2|86,Ank_5|PF13857.2|77,Ank_5|PF13857.2|3.9,Ank_5|PF13857.2|1e+02,Ank_5|PF13857.2|5.3,Ank_5|PF13857.2|0.036,Ank_5|PF13857.2|7.3e-05,Ank_5|PF13857.2|9.6e-07,Ank_5|PF13857.2|0.23,Ank_5|PF13857.2|6.9e-07,Ank_4|PF13637.2|0.0003,Ank_4|PF13637.2|7.3e+02,Ank_4|PF13637.2|36,Ank_4|PF13637.2|8.5e-05,Ank_4|PF13637.2|1.1e+02,Ank_4|PF13637.2|0.0045,Ank_4|PF13637.2|0.00019,Ank_4|PF13637.2|2e-06,Ank_4|PF13637.2|34,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|0.063,Ank_3|PF13606.2|3e+02,Ank_3|PF13606.2|0.036,Ank_3|PF13606.2|4.8e+03,Ank_3|PF13606.2|1.3e+04,Ank_3|PF13606.2|1.1,Ank_3|PF13606.2|1.8e+03,Ank_3|PF13606.2|2.8e+02,Ank_3|PF13606.2|0.33,Ank_3|PF13606.2|4.1,Ank_3|PF13606.2|0.012,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|7.3e+02,Ank|PF00023.26|1,Ank|PF00023.26|8.1e+02,Ank|PF00023.26|33,Ank|PF00023.26|2.9e+03,Ank|PF00023.26|6.8e+03,Ank|PF00023.26|1.3e+04,Ank|PF00023.26|66,Ank|PF00023.26|1.5e+02,Ank|PF00023.26|0.1,Ank|PF00023.26|9.1,Ank|PF00023.26|0.00051,Ank|PF00023.26|1.6e+04 S_Transcript_61042:146-2479(+)
ATGCACGGAGGAGTGAGAGTGTACAACAACACTACCGGCAGGTTTCTTGCCGGAAAACAGATATTTCCGATGAGCTCCGGCGACGTTGAAGCTGCTTCTCAGAAACTCGTTGACGCTTGTCTTGCTGGAGACACGAAGCTTTCTCTCGATCTCCTCGCTGATCCGCTCGTTGATATTGATTTCGTAGGTACGGTGAATTTGAGGTCCAGGAAAACGGAACTCGTTCCGTCTGGTGAGTCGACTCACCGAGTTGAAGTTGAGTACGAGGAGTTTAAGACCGAGGTTACGGCGTTGTTCCTCGCTTCTCACTCCGGGAATCTTCTCCTCGTTAGGAAATTGCTGAGTTTCGGGGCTGATGTAAACAAGAAACTGTTCCGTGGCTATGCAACTACAGCAGCAGTTAGGGAAGGTCATGTTGAAATTCTTGAAGCTCTTCTGAAAGCTGGGGCGTGTCAGCCAGCATGTGAAGAGGCATTAGTGGAGGCGAGTTATGTAGGGCGGGCAAGGCAAGCTGAATTACTTATGGGGTCCAACTTGATTAGCCAGCAGGTAGCAGTTCATGCCCTTGTCACTGCTTGCTCAAGGGGGTTTCTTGATGTTATTGATGTGTTGATTAAGTGTGGAGTGGATGCTAATGCAATGGATCGCATGATGCTTCTATCATCCAAGCCTTATCTTCACATGAATGTTGACTGCAATGCAATTGTTGCCGCAATTGTCAATAGGCAGACTTCTGTGGTTGAATTACTTTTAAGGGTAGGTGTCCGAACAGACATGAAAGTGAGTTTAGGAGCCTGGTCATGGGACCCAGCCACTGGGGAAGAGTACAAAGTAGGTGCTGGACTAGCTGAACCTTATGACATTGCTTGGTGTGCCGTGGAGTATTTTGAAGAAAGTGGTAGTATCTTGCGACTGCTCCTTCAACACCTTTCTCCAAACAGGCCTCATATGGGAAGGACCCTAATCTACCATGCTATCATATGTAACAATGCAGAAGCACTCAACGTGATATTGAGTTGTGGTGCAGAGGCAGAATTTCCACTAAAAACAGGCCAGGAAATTGAGATTCGTCCTATACATCTGGTTGCTCGGCTTGGGGCAGTGGATTTGCTTTGGCGTCTGATAAATGCTGGGTGCAATGTCAACTCCAGGAACCGTTCAGGAGAGACTGCTGTTATGATATGCACTAAATACAAGCATCAGGAATGTCTTAAAGCACTAGCCTCGGCAGGTGCTGACTTTGGTCTCGTAAATGCAGCTGGTGAGTCTGCAACATCAATAGCGGGATCCACAAAGTGGACATTAGGTTTCCAGCAACTAATCCTAAATTTGATTCGAGCCGGGCAAATCGTCAAGTCGAGCAACTCTACAGTATTCTCTTCTGCCATTTTTGTGGTCAAAGCAAACGATATTCAAGCATTGAAAATCCTTACAAAGCAACCAGGTGTTGCTCTTGATGACCAGGATGAAGATGGGTTCACAGCAGCGATGATTGCTGCATCAAGTGGTCAGGTAGAGGCCTTCCGTTTGCTTGTCTGCTCTGGAGCTGATGTATCGCTACGCAACAAGTATGGAGAAACAGCTTTTAGTTTGTCAGAGGAAAAGAACAAGGATCGAGAGGTTCTCGAAAAGATAATGTTAGATTATGCACTTGAAAAAGGGAAACGTGCTCCCACCACCTCCTATGCCCTACATTGTGCAGCACGGCGTGGGGACTTGGTTTTAGTTCGCCGCCTAACAAGTATGGGTTATGACGTTAATGTCACCGACGTTGATGGCTACACCCCACTCATGTTAGCCGCAAAGGAAGGCTACGGAAACCTGTGTCACTTCCTAATCTCACGTGGTGCAAGATGTGACATCAAAAATGAGAGACGCGAGACAGCACTGTCACTAGCAAGGCAGAATGGTGTCAGCAGTGATGCAGAGCGAGTAATACTGGATGAACTTGCACGGCAACTAGTACTGTGTGGTGATAGGGTGAAGAAACACACAAAAGGAGGCAAGGGGTCGCCTCATTCAAAGAAACTGAGGATGTTGGCAACGACTGGGGTCTTACGTTGGGGTAGATCAGGGAGGAGAAATGTGATCTGCACGGAGGCTGAAGTGGGTCCAAGCTGGCTGTTCCTTCAAGACAGACCAAGAAAGCGCGGTGGATATGAGCCAGGCCTGTTTCATGTGGTCACTATCAACAACAAGGAGGTCCACTTTGTCTGCAAAGGTGGTGCAGAGGTGGCTAAGTTGTGGGTCAGAGGCATAAAACTAGTGACTAGGGAAGCCATTTTTGGTAAGAAAACACTCCAGTCCATGTTTAGCCAGGAATTCGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61042.p1 GENE.S_Transcript_61042~~S_Transcript_61042.p1 ORF type:complete len:778 (+),score=129.73,Ank_2|PF12796.3|0.0019,Ank_2|PF12796.3|3.4e-07,Ank_2|PF12796.3|0.0048,Ank_2|PF12796.3|9.2e-06,Ank_2|PF12796.3|7.8e-06,Ank_2|PF12796.3|6.8e-08,Ank_2|PF12796.3|2.3e-08,Ank_5|PF13857.2|86,Ank_5|PF13857.2|77,Ank_5|PF13857.2|3.9,Ank_5|PF13857.2|1e+02,Ank_5|PF13857.2|5.3,Ank_5|PF13857.2|0.036,Ank_5|PF13857.2|7.3e-05,Ank_5|PF13857.2|9.6e-07,Ank_5|PF13857.2|0.23,Ank_5|PF13857.2|6.9e-07,Ank_4|PF13637.2|0.0003,Ank_4|PF13637.2|7.3e+02,Ank_4|PF13637.2|36,Ank_4|PF13637.2|8.5e-05,Ank_4|PF13637.2|1.1e+02,Ank_4|PF13637.2|0.0045,Ank_4|PF13637.2|0.00019,Ank_4|PF13637.2|2e-06,Ank_4|PF13637.2|34,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|0.063,Ank_3|PF13606.2|3e+02,Ank_3|PF13606.2|0.036,Ank_3|PF13606.2|4.8e+03,Ank_3|PF13606.2|1.3e+04,Ank_3|PF13606.2|1.1,Ank_3|PF13606.2|1.8e+03,Ank_3|PF13606.2|2.8e+02,Ank_3|PF13606.2|0.33,Ank_3|PF13606.2|4.1,Ank_3|PF13606.2|0.012,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|7.3e+02,Ank|PF00023.26|1,Ank|PF00023.26|8.1e+02,Ank|PF00023.26|33,Ank|PF00023.26|2.9e+03,Ank|PF00023.26|6.8e+03,Ank|PF00023.26|1.3e+04,Ank|PF00023.26|66,Ank|PF00023.26|1.5e+02,Ank|PF00023.26|0.1,Ank|PF00023.26|9.1,Ank|PF00023.26|0.00051,Ank|PF00023.26|1.6e+04 S_Transcript_61042:146-2479(+)
MHGGVRVYNNTTGRFLAGKQIFPMSSGDVEAASQKLVDACLAGDTKLSLDLLADPLVDIDFVGTVNLRSRKTELVPSGESTHRVEVEYEEFKTEVTALFLASHSGNLLLVRKLLSFGADVNKKLFRGYATTAAVREGHVEILEALLKAGACQPACEEALVEASYVGRARQAELLMGSNLISQQVAVHALVTACSRGFLDVIDVLIKCGVDANAMDRMMLLSSKPYLHMNVDCNAIVAAIVNRQTSVVELLLRVGVRTDMKVSLGAWSWDPATGEEYKVGAGLAEPYDIAWCAVEYFEESGSILRLLLQHLSPNRPHMGRTLIYHAIICNNAEALNVILSCGAEAEFPLKTGQEIEIRPIHLVARLGAVDLLWRLINAGCNVNSRNRSGETAVMICTKYKHQECLKALASAGADFGLVNAAGESATSIAGSTKWTLGFQQLILNLIRAGQIVKSSNSTVFSSAIFVVKANDIQALKILTKQPGVALDDQDEDGFTAAMIAASSGQVEAFRLLVCSGADVSLRNKYGETAFSLSEEKNKDREVLEKIMLDYALEKGKRAPTTSYALHCAARRGDLVLVRRLTSMGYDVNVTDVDGYTPLMLAAKEGYGNLCHFLISRGARCDIKNERRETALSLARQNGVSSDAERVILDELARQLVLCGDRVKKHTKGGKGSPHSKKLRMLATTGVLRWGRSGRRNVICTEAEVGPSWLFLQDRPRKRGGYEPGLFHVVTINNKEVHFVCKGGAEVAKLWVRGIKLVTREAIFGKKTLQSMFSQEFDD*

Click here to download the sequence:
Link to NCBI Protein BLAST