Transcript Information: S_Transcript_61231.p1


Annotated TAIR IDAT5G60980.2
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24543988-24546027 | Forward length=460
E-Value9E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5421967208824
Replicate 26.1116961249697
Replicate 34.6378589758367
Condition 2: 8 Hour
Replicate 16.5777726518465
Replicate 25.2303536112524
Replicate 36.1141723974996
Condition 3: 24 Hour
Replicate 16.0513331476892
Replicate 25.2986121367099
Replicate 35.3020800615863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61231.p1 GENE.S_Transcript_61231~~S_Transcript_61231.p1 ORF type:5prime_partial len:509 (+),score=98.16,NTF2|PF02136.16|4.6e-31,RRM_1|PF00076.18|1.2e-12,RRM_6|PF14259.2|1.6e-09 S_Transcript_61231:3-1529(+)
TCTCTCTCCAAAACTCAGAATTTTGGCTCAGATCAAACCAGCAACCTCCGCTGCCAGCTCGACATTCCGGCGAGTGGCACCGTCCCGCAAACGCCGACGATTGACCTGCTCTCTTTGCGCCGACCACACTCCCGCCCATCGAGCAGGATGGCCCTGCAAACAGCAGATCCTCAGATTATACCCAGTGCCCAGATGGTTGCTAATGCCTTTGTTGAGCAGTATTACCATATACTTCATCTTTCCCCTGAGCTGGTTTATCGATTTTATCAGGATTCAAGTGTACTTAGTCGCCAGGACGAGAATGGTGAAATGACATCAGTGACAACAATGCAAGGCATCAATGCAAAGATCCTTTCACTAGATTATAAAAGTTATAAGGCAGAGATAAAGACTGCTGATGCTCAGGAGTCCTACAAAGATGGGGTGATTGTTCTGGTTACTGGATGTTTAACAGGAAAGGACAACTTGAGAAGGAAATTTGCACAATCATTTTTCCTTGCTCCACAGTCCAAAGGATACTTTGTCCTGAATGACGTCTTTAGATATGTCGATGAAAGTGAACCACTGGAGTCAAATGCACTGACAATAGAGAAGATGAATGACTCTACAGCTGTTCAATTGGATAGAGACACAGAAGCCCTTCGTGCCCCTGATGCTCCTGTGAGAGATACAACAAATTCAAATGATAATAATGAGATTCATCCTGAAAAATCATTTCAAACATTAGAAATTGAGGCACAAGTAGTTGTTGAAGAGCAAGACGGCCCTGCTATCCCTCCATCGATTGAGAACCATGTTCCCGAGTCAAGTCATGCATCTGCCCAAGAGGACGGCATAAAGAATTCCTATGCATCTATTGTAAAGAAGGCAAAAGGTAGTTCTGGGCCCACAAAAGTCTATGTGCCCACTAATACAGTACAATCAGCTCCTACAAACACTCAAAAACAATCATCCTTGCGAGCAATCCCAGCTTCAGCTGCTGAACCATCGGTCCAGATTAATAGCAAAGCCTCTGAGGGTGTTAACTCTCATGAAGAAGTTGAAGGCCATTCCATTTATGTCCGCAATTTGCCTATGAATGTAACGGTTGGTCAGCTGGAGCAGGAATTCAAGAGATTTGGTCCAATTAAGCAAGATGGAGTACAAGTCAGAAGTAATAGGCAACAAGGATCATGTTATGGATTTGTAGAATTTCATTCTGAGAGTTCAATGGAAAGTGCAATACAGGCCTCTCCTGTTAACTTTGGAGGTCGACAAGCTTTTGTGGAAATAAAGAGGACTACTACTCGAGTTGATGGTGTTCGGGGTAGGTACCCTTCTGGAAGGGCAGGGTACCGCAGTGATAGTTTTAGGGTCCGAGGAGGATACAGTGGTGGCCGTGGCTTCAGCAGAAATGAGTTTGGTGGGCGAGGTGAATATTCTGGCCGTGGGAGAGGGCCTGCTGGACGTGGGGCTGATGGCTATCAACGAGGCAGAGGGAGACGTGGTCGCCAAGGTGGAATGAACAGAAATAGCAGCGCCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61231.p1 GENE.S_Transcript_61231~~S_Transcript_61231.p1 ORF type:5prime_partial len:509 (+),score=98.16,NTF2|PF02136.16|4.6e-31,RRM_1|PF00076.18|1.2e-12,RRM_6|PF14259.2|1.6e-09 S_Transcript_61231:3-1529(+)
SLSKTQNFGSDQTSNLRCQLDIPASGTVPQTPTIDLLSLRRPHSRPSSRMALQTADPQIIPSAQMVANAFVEQYYHILHLSPELVYRFYQDSSVLSRQDENGEMTSVTTMQGINAKILSLDYKSYKAEIKTADAQESYKDGVIVLVTGCLTGKDNLRRKFAQSFFLAPQSKGYFVLNDVFRYVDESEPLESNALTIEKMNDSTAVQLDRDTEALRAPDAPVRDTTNSNDNNEIHPEKSFQTLEIEAQVVVEEQDGPAIPPSIENHVPESSHASAQEDGIKNSYASIVKKAKGSSGPTKVYVPTNTVQSAPTNTQKQSSLRAIPASAAEPSVQINSKASEGVNSHEEVEGHSIYVRNLPMNVTVGQLEQEFKRFGPIKQDGVQVRSNRQQGSCYGFVEFHSESSMESAIQASPVNFGGRQAFVEIKRTTTRVDGVRGRYPSGRAGYRSDSFRVRGGYSGGRGFSRNEFGGRGEYSGRGRGPAGRGADGYQRGRGRRGRQGGMNRNSSAT*

Click here to download the sequence:
Link to NCBI Protein BLAST