Transcript Information: S_Transcript_61234.p1


Annotated TAIR IDAT5G10560.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3336335-3339351 | Reverse length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3323490382852
Replicate 23.5646122663304
Replicate 34.5824668604295
Condition 2: 8 Hour
Replicate 19.0313158503403
Replicate 28.050579559461
Replicate 38.4793763422508
Condition 3: 24 Hour
Replicate 12.700530272399
Replicate 22.8295089116125
Replicate 33.0871535379579


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61234.p1 GENE.S_Transcript_61234~~S_Transcript_61234.p1 ORF type:complete len:817 (+),score=141.16,Glyco_hydro_3_C|PF01915.18|2.4e-42,Glyco_hydro_3|PF00933.17|7.2e-37,Fn3-like|PF14310.2|7.3e+03,Fn3-like|PF14310.2|2.1e-06 S_Transcript_61234:177-2627(+)
ATGCTTCTCGGAGTGAACCCCAAAAATTCCATCATGGGTCCTAAAAACAGAAGTTACTACAGCAAGCTACTCTTCTCTACCCTTTTAACACTCATTTTCTCTCTCCAACTTCAACTCACAATACAATCAAGACCTGAATTCCCTTGCAATTTATCTCATGATGATTTCAAGTCCTACCCCTTTTGCAACACCTCACTGCCAATCTCAATCAGAGCCCAAACACTAATCTCTCTCCTTACTCTCCCTGAAAAAATCCAGTTTCTCTGTAATAACTTCACTGGCATTGACAGGTTGGCTATTCCACCATACCAGTGGTGGTCTGAATCTCTTCACGGCATCGCCACGAACGGGCCCGGAATCACCTTCTATGGGTCAGTCAAATCAGCTACCATGTTCCCACAAGTGCTTAATACAGCTGCTTCTTTTAACCGGAGTTTATGGTCTAAGGTGGCTTCTGCCATTGCTGTTGAAGGTAGGGCCATGTATAATTCTGGGCAAGCTGGTTTGACCTTTTGGGCTCCTAATATTAACATTTTTAGAGACCCCAGATGGGGTAGAGGTCAGGAGACTCCTGGGGAGGACCCCCTTCTGGTTTCGGCTTATGCCGTTGAGTATGTCAAGGGATTTCAGGGGGAGGCTTGGGGCAAGGATAGAGAAAGTAGTAGGAATAGGTATGATGATTATGGAGGGACTAGAGTGCTGAAAGAAGATGGTGGTGATGAGGGTGGTAAAGGGTTGATGTTATCTGCTTGTTGCAAGCATTTCACTGCTTATGATCTGGAAAAGTGGGGTAATTTCAGTAGATATTCCTTCAATGCTGTGGTTACTCTACAAGATATGGAGGATACCTACCAGCCACCTTTCAAGAGCTGTATTGAACAAGGTAAAGCAAGCTGCTTAATGTGTTCTTACAATAGTGTCAATGGTGTGCCTGCATGTGCAAGAGGTGATCTCTTACAGAAAGCTCGAAAAGACTGGGGATTCGACGGGTATGTCACCTCAGATTGTGATGCAGTGGCAACAATTTCCGAATACCAATTCTATGTTAAAACTCCAGAGGACGCAGTTGCTGCTGCTCTTAAAGCAGGAGTGGATATCAATTGTGGAACATACATGCTTCGTAATGCAGCATCTGCAATTGAAAAAGGAAAGCTTCGGGAGGAAGACATTGACCATGCTTTTCAAAACCTGCTCACAGTCCTGTTCCGTCTGGGCCTTTTTGATGGAGACCCTTCAAAAGGGACATTTGGAAGATTGGGAAATCGAGATATCTGTACAAAAGAGCACCAGAGACTGGCACTGGAAGCAGCAAGACAAGGCATGGTTCTTCTTAAAAATGATAAAATGTTCCTACCTTTAAGCAAGGATGACATATCTTCAGTAGCTATTATTGGACCTGGGGCAAGTTCTTCAAGTCAATTATTGGGTGGATATTCAGGAGTACCATGCAATGAAAAGAGCTATGTCGTGGGTATAGAGACATATATCAAGAAGGCAAGGTATGTTGGCGGGTGCATAGATGTAGCTTGTGAGTCCAATTCAACATTTGATGAAGCACTCCTAGCGGCAGAGTCATCTGATCATGTCATCTTAATTGTCGGACTGGACCTGGCTCAAGAAACCGAAGATAAAGACCGAGTTGGTCTTCTACCTCCTGGTAAACAGATGGACCTTGTATCTTCTGTAGCTGCTGTTAGCAGAAAGCCCATAATATTAGTCCTCACTGGTGGTGGCCCCCTGGATGTATCTTTTGCTGAAATAGACCCACGAATCGCTAGCATTCTCTGGGTTGGGTATCCTGGTGAGGCTGGTGGCAAAGCACTAGCACAAGTTATCTTCGGAGATTATAATCCAGGTGGGAGACTGCCAATGACTTGGTATCCTGAATCATTCACCAAGATACCCATGAATGATATGAACATGCGGCCTGATCCTTCTCGACTATATCCTGGAAGGACCCATAGGTTTTATACTGGAAGGGTTGTGTATGGCTTCGGACATGGCTTAAGTTACACAAATTACACTTACAAGCTTTTATCAGTGCCGGGTAATATAAATTTGCTCAGGGTTATGAAATCAGGTGCTAGGGAGAGAAAATTATCTCAAACAGATGTTAAGTTTGATTATATCGCTACTGATAAGCTTCTGTCTTGTGATATGCTGAAGTTCACTGTGCGAATATCTGTAATGAATGTTGGGGACATCGATGGGAGTCATGTTGTGATGCTATACTCGAGGGCAGCTATGGCTATGGAAGGTGCACCAAGAAAGCAGCTTGTTGGATTTAGCCGTGTGCATACTACAGCACATGGATCGACAGAAACAAGAATCATAGTTGACCCCTGTGAACATCTTTGTTTTGCTGATAAGCATGGAAAACGGATTCTGCCTCTTGGAGAGCATATTCTAACAATAGAGGAACTGGAGCATTCCTTGTTTATAGAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61234.p1 GENE.S_Transcript_61234~~S_Transcript_61234.p1 ORF type:complete len:817 (+),score=141.16,Glyco_hydro_3_C|PF01915.18|2.4e-42,Glyco_hydro_3|PF00933.17|7.2e-37,Fn3-like|PF14310.2|7.3e+03,Fn3-like|PF14310.2|2.1e-06 S_Transcript_61234:177-2627(+)
MLLGVNPKNSIMGPKNRSYYSKLLFSTLLTLIFSLQLQLTIQSRPEFPCNLSHDDFKSYPFCNTSLPISIRAQTLISLLTLPEKIQFLCNNFTGIDRLAIPPYQWWSESLHGIATNGPGITFYGSVKSATMFPQVLNTAASFNRSLWSKVASAIAVEGRAMYNSGQAGLTFWAPNINIFRDPRWGRGQETPGEDPLLVSAYAVEYVKGFQGEAWGKDRESSRNRYDDYGGTRVLKEDGGDEGGKGLMLSACCKHFTAYDLEKWGNFSRYSFNAVVTLQDMEDTYQPPFKSCIEQGKASCLMCSYNSVNGVPACARGDLLQKARKDWGFDGYVTSDCDAVATISEYQFYVKTPEDAVAAALKAGVDINCGTYMLRNAASAIEKGKLREEDIDHAFQNLLTVLFRLGLFDGDPSKGTFGRLGNRDICTKEHQRLALEAARQGMVLLKNDKMFLPLSKDDISSVAIIGPGASSSSQLLGGYSGVPCNEKSYVVGIETYIKKARYVGGCIDVACESNSTFDEALLAAESSDHVILIVGLDLAQETEDKDRVGLLPPGKQMDLVSSVAAVSRKPIILVLTGGGPLDVSFAEIDPRIASILWVGYPGEAGGKALAQVIFGDYNPGGRLPMTWYPESFTKIPMNDMNMRPDPSRLYPGRTHRFYTGRVVYGFGHGLSYTNYTYKLLSVPGNINLLRVMKSGARERKLSQTDVKFDYIATDKLLSCDMLKFTVRISVMNVGDIDGSHVVMLYSRAAMAMEGAPRKQLVGFSRVHTTAHGSTETRIIVDPCEHLCFADKHGKRILPLGEHILTIEELEHSLFIEM*

Click here to download the sequence:
Link to NCBI Protein BLAST