Transcript Information: S_Transcript_61382.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57854350511262
Replicate 20.39968821662164
Replicate 30.46775055284494
Condition 2: 8 Hour
Replicate 10.61812725556907
Replicate 20.48634453564623
Replicate 30.54061932331474
Condition 3: 24 Hour
Replicate 10.79148128589109
Replicate 20.49269155600755
Replicate 31.1879948451685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61382.p1 GENE.S_Transcript_61382~~S_Transcript_61382.p1 ORF type:5prime_partial len:276 (+),score=26.88,RVT_1|PF00078.23|2.6e-37 S_Transcript_61382:2-829(+)
CACTCATCCTGGCTGTTTTCTCCTAAGGGAGTTGCAAAGCCCCGAGTCCTGATGGTTTTGCATGCCCTCTTCTACCAAAAATTCTGGGATCTTCCGAGTCAGGACCTCATCTTCTCCACCACATCCCTCTTCTCTTCGGGAGCCTTCCCCTTGGGTTTCAACAAAACCCTTATTTGCCTAGTTCCTAAATGTCCCAACTCGAAGACAGTCAAACAGTTGAGACCCATAAGCCTGTGTAACACCAATTACAAAATTGTCTCCAAAATCTTGGTGAGTAGGCTTAGGCCCCTTCTCAAAAATCTCATCTCCCCCAACCAAAACAGCTTCATACCTGGGAGGGAATCTGACATCAATTATATTGTTGCCTTGGAAATCATCCACTCCATGGAGAAAAGGAAAGGAAAAAGGGGGTTCTTCGCGCTCAAGATTGACCTGGAGAAGGCATATGACTGGATGGAATGGGATTTCATTCGTAATATGTTATTCTCTTTCAACTTCGATCCTCACTCCATTAGACTCATCATGCAATGCATCACCACTGTCTCCACTTCTGTCCTAGTCAATGGGAGTCAAACGGAGGAATTCCAACCCTCCAGGGGACTTCGACAAAGGGATCCCCTTTCACCCTACATCTTTATCCTGTGCATGGAGTTTCTTTCCAAGATGATTCATGATGCATGTGATGATGGTTCTTGGACCCCATTCTACTTAAGGAGATCGAGCATGGGAATTTCCCACCTTCTCTTTGCGGACGATGTCCTTCTCTTTGGGGAAGCCAATCCCCAAACCCTCAGTGCCTTAGACTCCACCCTAGCACTCTTCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61382.p1 GENE.S_Transcript_61382~~S_Transcript_61382.p1 ORF type:5prime_partial len:276 (+),score=26.88,RVT_1|PF00078.23|2.6e-37 S_Transcript_61382:2-829(+)
HSSWLFSPKGVAKPRVLMVLHALFYQKFWDLPSQDLIFSTTSLFSSGAFPLGFNKTLICLVPKCPNSKTVKQLRPISLCNTNYKIVSKILVSRLRPLLKNLISPNQNSFIPGRESDINYIVALEIIHSMEKRKGKRGFFALKIDLEKAYDWMEWDFIRNMLFSFNFDPHSIRLIMQCITTVSTSVLVNGSQTEEFQPSRGLRQRDPLSPYIFILCMEFLSKMIHDACDDGSWTPFYLRRSSMGISHLLFADDVLLFGEANPQTLSALDSTLALFC*

Click here to download the sequence:
Link to NCBI Protein BLAST