Transcript Information: S_Transcript_61385.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6504186812515
Replicate 21.8813231405633
Replicate 31.1079938344799
Condition 2: 8 Hour
Replicate 10.99187861940153
Replicate 21.7776081283504
Replicate 32.1481086733702
Condition 3: 24 Hour
Replicate 11.3970565023054
Replicate 21.229819232825
Replicate 30.97759862035334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61385.p1 GENE.S_Transcript_61385~~S_Transcript_61385.p1 ORF type:internal len:516 (+),score=41.55,RVT_1|PF00078.23|9e-42 S_Transcript_61385:1-1545(+)
ACAAACCATGAGCAAATTCAAGTCGCTCATCCTCCCTCACCGAGTGAGGTCCGTGAGGCTGTCTTCTCCCAAGGGAGTTGCAAAGCCCCGGGCCCCGATGATTTCCATGCCCTCTTCTACCAAAAATTCTGGAATCTTCTGAGTCAAAACCTCATCTCCTCCATCACTTCCCTCTTCTCTTCGGGAGCCTTCCCCTTGGGTTTCAACAAAACCCTTATTTGCCTAGTTCCTAAGTGTCCCAACCCGGAGACAGTCAAACAATTGAGACCCATAAGCCTGTGTAACACCAATTACAAAATTGTCTCCAAAATCTTGGTGAGTAGGCTTAGGCCCCTTCTCAAAAATCTCATCTCCCCCAACCAAAACAGCTTCATACCTGGGAGGGAATCTGACATCAATTATATTGTTGCCTTGGAAATCATCCACTCCATGGAGAAAAGGAAAGGGAAAAGGGGATTCTTCGCACTCAAGATTGACCTAGAGAAGGCATATGACCGGATGGAATGGGATTTCATTCGTAATATGTTATTCTCTTTCAACTTCGATCCTCACTCCATTAGACTCATCATGCAATGCATCACCACTGTCTCCACTTCTGTCCTAGTCAATGGGAGTCAAACGGAGGAATTCCAACCCTCCAGGGGACTTCGACAAAGGGATCCCCTTTCACCCTACATCTTTATCCTGTGCATGGAGTTTCTTTCCAAGATGATTCATGATGCTTGTGATGATGGTTCTTGGACCCCCTTCTACTTTAGGAAATCGGGCATGGGAATTTCCCACCTTCTCTTTGCGGACGATGTCCTTCTCTTTGGGGAAGCCAATCCCCAAACTCTTAGTGCCTTAGACTCTACCCTAGCACTCTTCTGCCAAGCTTCAGGACAAAAAGTTAATGTAGCCAAGAGTAGCCTTGTGTTCTCCCCGAATACCTCTCAAGATATGGTTAGAGCCTTTGAGGATACCTTAGGTACGAGAACCTCCCATAACCTTGGGACCTACCTTGGCCTCCCCTTAACAAGTAAGAGACCAACCAAAAACCAATTACGGGGCATAGTCAACAAGGTTAGGGACAGGATAGCCTCTTGGAAAACCAACTTCATCACCAGGGCGGGTAGACTTTGCCTCATCAATGCCACCCTAAATGCCATACCTAGTTATTACATGCACAGTATTGCCTTCCCCAAAAGCCTTTCCCATGAGATGAATAGAACTGCCAACAACTTCCTGTGGGGTGACTCTTTGGAAAAAAAGAAGCTGCACCTTGTTGGGTGGGAAAATATTACCAAGCCTAAGAACCAAGGGGGGCTGGGTATCCGGGATTTGAGGGACCTCAACACCGCTCTCATGGCCAAGTTAGGTTGGAAAACCTTGATGTCTAATAATAACCTCGCGGGTAAGGTCCTGAGAGAAAAATACGTTTCACATAGGGCCCACCCTACTCCCTTCGGGGTGGGCTCGCATGTGTGGCAGGACATTGGCAAAGGGTGGGATATCATCACAAACCACTCTTTGTGGGCTCTGGGGAAGGGCCTCGAGGTTTTCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61385.p1 GENE.S_Transcript_61385~~S_Transcript_61385.p1 ORF type:internal len:516 (+),score=41.55,RVT_1|PF00078.23|9e-42 S_Transcript_61385:1-1545(+)
TNHEQIQVAHPPSPSEVREAVFSQGSCKAPGPDDFHALFYQKFWNLLSQNLISSITSLFSSGAFPLGFNKTLICLVPKCPNPETVKQLRPISLCNTNYKIVSKILVSRLRPLLKNLISPNQNSFIPGRESDINYIVALEIIHSMEKRKGKRGFFALKIDLEKAYDRMEWDFIRNMLFSFNFDPHSIRLIMQCITTVSTSVLVNGSQTEEFQPSRGLRQRDPLSPYIFILCMEFLSKMIHDACDDGSWTPFYFRKSGMGISHLLFADDVLLFGEANPQTLSALDSTLALFCQASGQKVNVAKSSLVFSPNTSQDMVRAFEDTLGTRTSHNLGTYLGLPLTSKRPTKNQLRGIVNKVRDRIASWKTNFITRAGRLCLINATLNAIPSYYMHSIAFPKSLSHEMNRTANNFLWGDSLEKKKLHLVGWENITKPKNQGGLGIRDLRDLNTALMAKLGWKTLMSNNNLAGKVLREKYVSHRAHPTPFGVGSHVWQDIGKGWDIITNHSLWALGKGLEVFF

Click here to download the sequence:
Link to NCBI Protein BLAST