Transcript Information: S_Transcript_61482.p1


Annotated TAIR IDAT5G41950.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16785825-16789360 | Forward length=565
E-Value9.3E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.011053588014
Replicate 222.576873974389
Replicate 322.919128336902
Condition 2: 8 Hour
Replicate 126.087370679211
Replicate 223.805384571981
Replicate 322.433377479417
Condition 3: 24 Hour
Replicate 118.748424277364
Replicate 221.475611746131
Replicate 319.149163810486


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61482.p1 GENE.S_Transcript_61482~~S_Transcript_61482.p1 ORF type:complete len:515 (+),score=84.50,TOM20_plant|PF06552.8|7.5e+03,TOM20_plant|PF06552.8|2e-06,TOM20_plant|PF06552.8|3.6e-06,TPR_11|PF13414.2|23,TPR_11|PF13414.2|0.03,TPR_11|PF13414.2|0.0047,TPR_11|PF13414.2|3,TPR_17|PF13431.2|0.47,TPR_17|PF13431.2|0.99,TPR_17|PF13431.2|1.1,TPR_17|PF13431.2|1.7e+03 S_Transcript_61482:228-1772(+)
ATGTCCGCGGTGCCGGAGTTATCCGAATCACAAAACGCGTCGTTACAATCAGTTCCGGAATCGGAACCCCAACAACTAGTAGAAGAAGCAACGGCGACAGAAAATGCAGATCCCCATCAATCAAACGACGCCGTGGAACAGCAACTGGAGCCTGTTGCTTCTCGAAAGGATCCGATTCACGACGAATCCGGGTCCCTCCCCACCGGATCAACCGAGGAGTCCAAGCCCAATCAATCTCAGTTACAGGGTGAGCTGAAAAAGGATGAAGGGAGCCGAAGCTTGACGATGAGAGAATTGTTGAATGGTTTGAAAGGAGATCAGACTCAATCCCCTGATTCTCCCTCTCATCAAAGTGAAGCAGTGTCTCAGCAGCAGTCACACTCACAGCAGAACAATGCTGCCATGGAACTTATTAACAGTGTCACGGGTGTTGATGATGAAGGTCGATCTCGCCAAAGGATTCTCACTTTTGCTGCTAGGAGGTATGCTAGTGCAATTGAGAGAAATCCTGGAGATTATGATGCCCTTTACAACTGGGCTCTCGTCCTTCAGGAGAGCGCAGATAACGTTGACCCTGACTCTGCTTCACCTTCCAAAGATGCGCTGCTTGAGGAGGCTTGCAAGAAGTACGAGGAAGCAACTCGTCTTTGTCCTACCCTGCATGATGCATATTATAATTGGGCTATAGCTATCTCTGATCGAGCAAGAATGCGGGGTCGTACAAAGGAGGCTGAAGAATTGTGGGAACAAGCCACGAAACACTATGAAAAAGCTGTGCAGTTGAATTGGAACAGCCCCCAGGCACTGAACAACTGGGGACTCGCACTGCAGGAACTCAGTGCTATAGTTCCTGCAAAGGAAAAGCATAACATTGTTAAGACGGCAATTAGTAAGTTCCGTGCCGCAATTCAATTGCAATTTGACTTTCACAGAGCTATTTACAACCTTGGCACTGTTCTGTATGGCTTAGCCGAGGACTTGCTAAGAATTGGGGGAGCAGTCAGTCCAAAAGATGTATCACCGAATGAGTTGTACAGTCAGTGTGCTATCTACATTGCGGCTGCTCATGCGTTGAAGCCAAATTACTCAGTCTACCGCAGTGCATTGAGGCTTGTTCGATCAATGCTGCCTTTGCCCTATCTTAAAGTGGGATATCTAACAGCATCACCTGTAGGCAATCCAATTGCCCCGCATAGTGATTGGAAGCGCACACAGTTTGTCCTTAACCATGAGGGACTTTATCAGCTTGTTCTATTAGATCAAAAGCCATCAAGACAGAGCCTTTCAGGCAAGCCAACAGACGCTGCAAATTCTAAAAACTCAGCCATCAAAGTTGACATACCTGATATTGTTTCAGTGTCAGCTTGTTCTGATCTTACATTGCCAGCTGGAGCTGGCCTCTGTATTGACACAACCCAGGGACCGGTTTACTTGGTAGCGGACTCATGGGAGTCTTTGGACGGATGGCTGGATGCAATGCGTTTAGTTTACACAATTTTTGCACGAGGTAAAAGTGATGTTCTTGCCGGTATAATCGCTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61482.p1 GENE.S_Transcript_61482~~S_Transcript_61482.p1 ORF type:complete len:515 (+),score=84.50,TOM20_plant|PF06552.8|7.5e+03,TOM20_plant|PF06552.8|2e-06,TOM20_plant|PF06552.8|3.6e-06,TPR_11|PF13414.2|23,TPR_11|PF13414.2|0.03,TPR_11|PF13414.2|0.0047,TPR_11|PF13414.2|3,TPR_17|PF13431.2|0.47,TPR_17|PF13431.2|0.99,TPR_17|PF13431.2|1.1,TPR_17|PF13431.2|1.7e+03 S_Transcript_61482:228-1772(+)
MSAVPELSESQNASLQSVPESEPQQLVEEATATENADPHQSNDAVEQQLEPVASRKDPIHDESGSLPTGSTEESKPNQSQLQGELKKDEGSRSLTMRELLNGLKGDQTQSPDSPSHQSEAVSQQQSHSQQNNAAMELINSVTGVDDEGRSRQRILTFAARRYASAIERNPGDYDALYNWALVLQESADNVDPDSASPSKDALLEEACKKYEEATRLCPTLHDAYYNWAIAISDRARMRGRTKEAEELWEQATKHYEKAVQLNWNSPQALNNWGLALQELSAIVPAKEKHNIVKTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDLLRIGGAVSPKDVSPNELYSQCAIYIAAAHALKPNYSVYRSALRLVRSMLPLPYLKVGYLTASPVGNPIAPHSDWKRTQFVLNHEGLYQLVLLDQKPSRQSLSGKPTDAANSKNSAIKVDIPDIVSVSACSDLTLPAGAGLCIDTTQGPVYLVADSWESLDGWLDAMRLVYTIFARGKSDVLAGIIAG*

Click here to download the sequence:
Link to NCBI Protein BLAST