Transcript Information: S_Transcript_61503.p1


Annotated TAIR IDAT5G52870.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21428191-21429367 | Reverse length=326
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6060963676274
Replicate 23.091215020421
Replicate 32.685343440744
Condition 2: 8 Hour
Replicate 17.9091420132224
Replicate 28.235790433306
Replicate 36.5587223399943
Condition 3: 24 Hour
Replicate 15.7612879535633
Replicate 23.860319554213
Replicate 35.6818891242294


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61503.p1 GENE.S_Transcript_61503~~S_Transcript_61503.p1 ORF type:5prime_partial len:364 (+),score=28.42 S_Transcript_61503:2-1093(+)
TCCCTTCCACCCTTTATAAAGAGACCGACTCTCACTTTTCTCTCAAACACACCACATCCAATTACAACCCAACCCTTCCTTTCCCCTTCTCTTAGTCTCTCACTCTCTCTTTCTCTCTCATTCACTTTCACCAAATTTGACTCTTCAAAATCAAATCAAAAGAGAACAAGAATGGAAGCATTTGCTCTGCTCAAGTTCTGGAAAACCAATAATTCAAAGGTAGCCGCCGGAGCCACTGTCGTCGACGGCGATACTACTTTTTCCGATCCTTTCATAGAAGAAAGCGACGATGACGACGACTCTTTCTTCGAATTAGAGCTCGCAATGCCTAACAACTACGACTCCAAATCCCCCAAACCTGACTTTTCCACCAAGAAATTCGAGCAAGAGAGAGAAATCGAACCTAAACCTACCTCAAAACCTCAGTCTCCAATCTCTATTCTCCGATCAGCTCCTCCGAAGCTCAAAGTCTTCATGTTCGGCAAATTCAACCGTAAAAAATCATCGAAACGAGAAGACTTCGAAATTGAGAGTCTCTCTTCGCCGAACTTCTCACCAAGAGGAAGCGAAAACAAAAATTCGAACCTCTTTACTGTCAAATTCAAGATCGAGGACGGTTCGATCGTTCCGAAATTCACTCGTAGCAACAGTTCGAGTCTTCTTAGCCCTAACGAGAGCTACGAAACTTCTAGACGCTTCTCGAAGGACGTCGTTCAGAAGTACTTGAATCTCATCAAGCCCAGATCATCTAGAAAGTTTTCCGAAACGGAGAAATTCGCTCCTTCTCCGACGAGATCAACAACGGCGTCGTTTCCGTCACCGAGGAAAGAGAAAGAGCAGAGCAGTAGGTTTAAGGTAAAATGTAAGCAGTTAGGGAAGAGCAAATCAGCTTCGTCTGTCATCGGAGCTCCATCACCGCTGGTGAGAAACGATCATCCTCTTGACTGTATTGAAGGCGCTATCTTACACTGCAAGCGCTCTCTTACCTCCTCCAAAGGACATTCATCGCTATCGAGATGTAGCAGCGATCCATCACACGAGAAGTCTATTCAAGTGTCAGAGAGACCAGAAGGAAGAGAAGAAGAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61503.p1 GENE.S_Transcript_61503~~S_Transcript_61503.p1 ORF type:5prime_partial len:364 (+),score=28.42 S_Transcript_61503:2-1093(+)
SLPPFIKRPTLTFLSNTPHPITTQPFLSPSLSLSLSLSLSFTFTKFDSSKSNQKRTRMEAFALLKFWKTNNSKVAAGATVVDGDTTFSDPFIEESDDDDDSFFELELAMPNNYDSKSPKPDFSTKKFEQEREIEPKPTSKPQSPISILRSAPPKLKVFMFGKFNRKKSSKREDFEIESLSSPNFSPRGSENKNSNLFTVKFKIEDGSIVPKFTRSNSSSLLSPNESYETSRRFSKDVVQKYLNLIKPRSSRKFSETEKFAPSPTRSTTASFPSPRKEKEQSSRFKVKCKQLGKSKSASSVIGAPSPLVRNDHPLDCIEGAILHCKRSLTSSKGHSSLSRCSSDPSHEKSIQVSERPEGREEEN*

Click here to download the sequence:
Link to NCBI Protein BLAST