Transcript Information: S_Transcript_61504.p1


Annotated TAIR IDAT5G52870.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21428191-21429367 | Reverse length=326
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4082045178569
Replicate 23.6671121607858
Replicate 34.1207203238563
Condition 2: 8 Hour
Replicate 17.5539529733714
Replicate 25.2424495450041
Replicate 36.2727834913842
Condition 3: 24 Hour
Replicate 13.4523249113201
Replicate 25.9901627327131
Replicate 34.1234949981116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61504.p1 GENE.S_Transcript_61504~~S_Transcript_61504.p1 ORF type:5prime_partial len:367 (+),score=26.74 S_Transcript_61504:2-1102(+)
TCCCTTCCACCCTTTATAAAGAGACCGACTCTCACTTTTCTCTCAAACACCACCACATCCAATTCCAACCCCATTCCTCCTTTCCCCTTCTCTCAGTCTCTCACACAGTTTCTTTTTCTCTTATTCACTCTCACCGAATCTTACTCTCCAAAATCAAAATCAAATCAAAAGAGAACAAAAATGGAAGCATTTGCTCTCCTCAAGTTCTGGAAAACCAGTACCTCAAAAGTAGCCGCCGGGGCCACCGTCGTCGACGGCGATAAATCTTTTTCCGATCCTTTCACCGAAGAAAGCGACGATGACGACGACTCTTTGTTCGAATTAGAGCTCACAATGCCTAAAAACTACGACTCCAAATCCCCCAAACCTGACTTTTCCACCAAGAAATTCGAGCAAGAGAGAGAAATCGAACCTAAACCTACCTCAAAACCTCAGTCTCCAATCTCTATTCTCCGATCAGCTCCTCCGAAGCTCAAAGTCTTCATGTTCGGCAAACGCAACCGTAAAAAATCATCGAAACAAGAAGACTTCGAAATTGAGAGTTTCTCTTCGCCGAACTTCTCACCAAGAGGAAGCGAAAACAAAAATTCGAACCTCTTTACTGTCAAATTCAAGATCGAGGACGGTTCGATCGTTCCGAAATTCACTCGTAGCAACAGTTCGAGTCTTCTTAGCCCTAACGAGAGCTACGAAACTTCTAGACGCTTCTCGAAGGACGTCGTTCAGAAGTACTTGAATCTCATCAAGCCCAGATCATCTAGAAAGTTTTCCGAAACGGAGAAATTCGCTCCTTCTCCGACGAGATCAACAACGGCGTCGTTTCCGTCACCGAGGAAAGAGAAAGAGCAGAGCAGTAGGTTTAAGGTAAAATGTAAGCAGTTAGGGAAGAGCAAATCAGCTTCGTCTGTCATCGGAGCTCCATCACCGCTGGTGAGAAACGATCATCCTCTTGACTGTATTGAAGGCGCTATCTTACACTGCAAGCGCTCTCTTACCTCCTCCAAAGGACATTCATCGCTATCGAGATGTAGCAGCGATCCATCACACGAGAAGTCTATTCAAGTGTCAGAGAGACCAGAAGGAAGAGAAGAAGAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61504.p1 GENE.S_Transcript_61504~~S_Transcript_61504.p1 ORF type:5prime_partial len:367 (+),score=26.74 S_Transcript_61504:2-1102(+)
SLPPFIKRPTLTFLSNTTTSNSNPIPPFPFSQSLTQFLFLLFTLTESYSPKSKSNQKRTKMEAFALLKFWKTSTSKVAAGATVVDGDKSFSDPFTEESDDDDDSLFELELTMPKNYDSKSPKPDFSTKKFEQEREIEPKPTSKPQSPISILRSAPPKLKVFMFGKRNRKKSSKQEDFEIESFSSPNFSPRGSENKNSNLFTVKFKIEDGSIVPKFTRSNSSSLLSPNESYETSRRFSKDVVQKYLNLIKPRSSRKFSETEKFAPSPTRSTTASFPSPRKEKEQSSRFKVKCKQLGKSKSASSVIGAPSPLVRNDHPLDCIEGAILHCKRSLTSSKGHSSLSRCSSDPSHEKSIQVSERPEGREEEN*

Click here to download the sequence:
Link to NCBI Protein BLAST