Transcript Information: S_Transcript_61733.p1


Annotated TAIR IDAT5G49960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20324173-20327687 | Reverse length=824
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6710489147671
Replicate 21.359683542498
Replicate 31.8013835244447
Condition 2: 8 Hour
Replicate 14.3146719943967
Replicate 22.5233364163413
Replicate 33.2221630100553
Condition 3: 24 Hour
Replicate 11.9812801305423
Replicate 21.0014242324433
Replicate 31.8769893510784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61733.p1 GENE.S_Transcript_61733~~S_Transcript_61733.p1 ORF type:complete len:860 (+),score=182.10,Castor_Poll_mid|PF06241.8|6.3e-39,Castor_Poll_mid|PF06241.8|6.3e+03,Castor_Poll_mid|PF06241.8|2e+02 S_Transcript_61733:86-2665(+)
ATGCCAATACCCCCAAGCCCAAAACCGACCCCTTCCCCGCCCACCAAGCTACTGGAAAGAAGTCGCCCAAGACCTCTTTTGAGTAAATGCCATTCGTCCCTTTGTGGGTCCCCCAAAACTCGCCCTGTTTTCCGGCGTCTCTCCTCTTCTCTCTCCTCCACCTCCAATTCAGGTCCGGGCCTGGGTCCGGGCTCGGCGGATCCGGAACTGGGCCCGGAAACTAGCAGTGTGGAGGAGGCCCAATTGAAGAACGGTTGCAGTTCTGCTTTGAGTTTGGTGATTTGGGTCAGGAATTGGTACTTATTTTTTTTGCTTATTTGCACTTGTGTATCATCCATGTGCTATATAATGTCACTTTGTAAGAGACTTGCTGCACTTCAGGGTGAAATGGTTGAACTTCGCAGAATGTGTAAAGGAAACGATTATGTTGATAAGAACAACATTGAAGCCTTCCAGTGTAGAGATGACAAGTCAGCATATTATTTTGGTGAAGCTGATAGTAAAACTATTTGTTTATATATTGTATTCTTCACTCTTGTGATGCCTTTTATTGTGTACAAATATCTCGATTATCTTCCTCGACTGAAAAGCCTTTGTCTGAGGACAGAGAATTACAAAGAGGAGGTTCCACCGAAGAAGAAACTTGCATATATGGTTGATGTGTGCTTCTCTGTATATCCTTATGCGAAACTGCTTGCACTGCTCTTTGCAACAGTCTTTTTGATAGGATTTGGTGGCTTGGCATTATATGCGGTTAGTGACAATAGCCTTGCAGAGGCTCTTTGGCTTTCATGGACTTTTGTTGCAGACTCTGGAAATCATGCTGACAGGGTGGGAACCGGTCCAAGGATTGTTTCTATATCTATTAGTGCTGGTGGTATGCTGATATTTGCCATGATGTTGGGGCTTGTTTCTGATGCTATATCTGAGAAGGTGGATTCACTGCGGAAGGGAAAGAGCGAAGTCATTGAAAGAAACCATGTATTGATCCTCGGATGGAGTGACAAATTGGGTTCTCTTTTGAAGCAACTTGCTATAGCTAATAAAAGCCTTGGTGGTGGTGTCATTGTTGTTCTGGCAGAAAGAGACAAGGAGGAGATGGAGATGGATATTGCTAAGTTAGAATTTGATTTCATGGGAACATCAGTAATTTGTAGAAGTGGCAGTCCTCTTATACTCGCCGATTTAAGAAAGGTTTCAGTGTCAAAGGCACGTGCTATCATTGTGCTAGCATCTGATGAAAATTCTGATCAGAGTGATGCAAGAGCTTTGAGGGTTGTCCTTAGCCTCACTGGAGTCAAAGAAGGACTACGAGGTCATGTTGCTGTGGAATTGAGTGATCTTGACAATGAGCCTTTGGTCAAGCTTGTTGGTGGAGAACTTGTTGAAACAGTTGTAGCTCATGATGTGATTGGGCGTTTGATGATACAGTGTGCACTTCAACCTGGACTTGCACAGATATGGGAGAATATCTTAGGATTTGAGAATGCCGAGTTTTATATCAAAAGGTGGTCCGAGCTAGATGGTTCATATTTTGAAGACGTGTTTTTCTCATTTCCTGATGCTGTGCCATGTGGAGTCAAAGTTGCTGCTGAGGATGGGAGGATCATTATGAATCCAGAAGACGATTATATTATAAGAGAAGGTGATGAGATACTTGTTATAGCTGAAGATGATGACACATATGCTCCAGGACCCCTGCCAAAGGTTCATAAAGGTCTCTTCCCAATGATTATTGACCCACCTAAATATCCGGAGAAGATATTGTTTTGTGGGTGGCGTCGAGATATTGAGGATATGATAATGGTACTCGAAGCACTTCTAGCTCCAGGATCAGAATTGTGGATGCTTAATGAGGTTACAGAAAAAGAAAGAGAGAAGAAGTTGACTGATGGTGGCCTTGATATCTCAAAACTACAGAACATAAAGCTTGTGCATCGTGTGGGAAATGCTGTTATAAGACGACACCTCCAAGCGCTTCCTTTGGAGTCATTTGATTCGATTTTAATTCTTGCAGATGAATCTTTGGAGGATTCAGTTGTACATTCTGATTCAAGGTGCCTTGCGACATTGCTTCTCATCCGAGATATTCAGTCAAAGCGTCTTCCTTATAAAGACCCAAAATCATCCAATTTAAGGCATCCAGGGTTTTGTCACAGCTCTTGGATTCGCGAAATGCAGCAAGCTTCTGACAAATCAATAATTATTAGTGAAGTCCTGGATTCTCGGACCAGGAACCTGGTGTCTGTTTCAAGAATAAGCGATTATGTATTATCAAATGAGTTAGTGAGTATGGCTCTGGCAATGGTGGCTGAAGACAAGCAAATTAATCGTGTTCTTGAGGAGCTCTTCGCAGAGAAGGGCAATGAGATGTGTATCAAACCAGCAGAGTTCTATCTGTATGACCAGGAAGAAATATCTTTCTATGATGTGATGATTAGAGGTCGACAAAGGCAAGAAATCGTGATAGGTTATCGCCTTGCTGATTCAGATAATGCAGTGATTAATCCTTCAAGGAAAGATGAACCCAGAAAATGGTCTATTGAGGATGTCTTTGTTGTCATCTCTCGGAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61733.p1 GENE.S_Transcript_61733~~S_Transcript_61733.p1 ORF type:complete len:860 (+),score=182.10,Castor_Poll_mid|PF06241.8|6.3e-39,Castor_Poll_mid|PF06241.8|6.3e+03,Castor_Poll_mid|PF06241.8|2e+02 S_Transcript_61733:86-2665(+)
MPIPPSPKPTPSPPTKLLERSRPRPLLSKCHSSLCGSPKTRPVFRRLSSSLSSTSNSGPGLGPGSADPELGPETSSVEEAQLKNGCSSALSLVIWVRNWYLFFLLICTCVSSMCYIMSLCKRLAALQGEMVELRRMCKGNDYVDKNNIEAFQCRDDKSAYYFGEADSKTICLYIVFFTLVMPFIVYKYLDYLPRLKSLCLRTENYKEEVPPKKKLAYMVDVCFSVYPYAKLLALLFATVFLIGFGGLALYAVSDNSLAEALWLSWTFVADSGNHADRVGTGPRIVSISISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLGSLLKQLAIANKSLGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLRKVSVSKARAIIVLASDENSDQSDARALRVVLSLTGVKEGLRGHVAVELSDLDNEPLVKLVGGELVETVVAHDVIGRLMIQCALQPGLAQIWENILGFENAEFYIKRWSELDGSYFEDVFFSFPDAVPCGVKVAAEDGRIIMNPEDDYIIREGDEILVIAEDDDTYAPGPLPKVHKGLFPMIIDPPKYPEKILFCGWRRDIEDMIMVLEALLAPGSELWMLNEVTEKEREKKLTDGGLDISKLQNIKLVHRVGNAVIRRHLQALPLESFDSILILADESLEDSVVHSDSRCLATLLLIRDIQSKRLPYKDPKSSNLRHPGFCHSSWIREMQQASDKSIIISEVLDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEKGNEMCIKPAEFYLYDQEEISFYDVMIRGRQRQEIVIGYRLADSDNAVINPSRKDEPRKWSIEDVFVVISRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST