Transcript Information: S_Transcript_61736.p1


Annotated TAIR IDAT5G49960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20324173-20327687 | Reverse length=824
E-Value2E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7423145866421
Replicate 21.5860285176134
Replicate 31.2784438363471
Condition 2: 8 Hour
Replicate 11.2866410075805
Replicate 22.699555548311
Replicate 32.0522317976555
Condition 3: 24 Hour
Replicate 12.2153347827432
Replicate 22.9093468005581
Replicate 32.3635548672317


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61736.p1 GENE.S_Transcript_61736~~S_Transcript_61736.p1 ORF type:complete len:779 (+),score=155.74,Castor_Poll_mid|PF06241.8|5.4e-39,Castor_Poll_mid|PF06241.8|5.7e+03,Castor_Poll_mid|PF06241.8|1.7e+02 S_Transcript_61736:86-2422(+)
ATGCCAATACCCCCAAGCCCAAAACCGACCCCTTCCCCGCCCACCAAGCTACTGGAAAGAAGTCGCCCAAGACCTCTTTTGAGTAAATGCCATTCGTCCCTTTGTGGGTCCCCCAAAACTCGCCCTGTTTTCCGGCGTCTCTCCTCTTCTCTCTCCTCCACCTCCAATTCAGGTCCGGGCCTGGGTCCGGGCTCGGCGGATCCGGAACTGGGCCCGGAAACTAGCAGTGTGGAGGAGGCCCAATTGAAGAACGGTTGCAGTTCTGCTTTGAGTTTGGTGATTTGGGTCAGGAATTGGTACTTATTTTTTTTGCTTATTTGCACTTGTGTATCATCCATGTGCTATATAATGTCACTTTGTAAGAGACTTGCTGCACTTCAGGGTGAAATGGTTGAACTTCGCAGAATGTGTAAAGGAAACGATTATGTTGATAAGAACAACATTGAAGCCTTCCAGTGTAGAGATGACAAGTCAGCATATTATTTTGGTGAAGCTGATAGTAAAACTATTTGTTTATATATTGTATTCTTCACTCTTGTGATGCCTTTTATTGTGTACAAATATCTCGATTATCTTCCTCGACTGAAAAGCCTTTGTCTGAGGACAGAGAATTACAAAGAGGAGGTTCCACCGAAGAAGAAACTTGCATATATGGTTGATGTGTGCTTCTCTGTATATCCTTATGCGAAACTGCTTGCACTGCTCTTTGCAACAGTCTTTTTGATAGGATTTGGTGGCTTGGCATTGTATGCGGTAAGTGACAATAGCCTTGTAGAGGCTCTTTGGCTTTCATGGACTTTTGTTGCAGACTCTGGAAATCATGCTGACAGGGTGGGAACCGGTCCAAGGATTGTTTCTATATCTATTAGTGCTGGTGGTATGCTGATATTTGCCATGATGTTGGGGCTTGTTTCTGATGCTATATCTGAGAAGGTGGATTCACTGCGGAAGGGAAAGAGCGAAGTCATTGAAAGAAACCATGTATTGATCCTCGGATGGAGTGACAAATTGAGTGATGCAAGAGCTTTGAGGGTTGTCCTTAGCCTCACTGGAGTCAAAGAAGGACTACGAGGTCATGTTGCTGTGGAATTGAGTGATCTTGACAATGAGCCTTTGGTCAAGCTTGTTGGTGGAGAACTTGTTGAAACAGTTGTAGCTCATGATGTGATTGGGCGTTTGATGATACAGTGTGCACTTCAACCTGGACTTGCACAGATATGGGAGAATATCTTAGGATTTGAGAATGCCGAGTTTTATATCAAAAGGTGGTCCGAGCTAGATGGTTCATATTTTGAAGACGTGTTTTTCTCATTTCCTGATGCTGTGCCATGTGGAGTCAAAGTTGCTGCTGAGGATGGGAGGATCATTATGAATCCAGAAGACGATTATATTATAAGAGAAGGTGATGAGATACTTGTTATAGCTGAAGATGATGACACATATGCTCCAGGACCCCTGCCAAAGGTTCATAAAGGTCTCTTCCCAATGATTATTGACCCACCTAAATATCCGGAGAAGATATTGTTTTGTGGGTGGCGTCGAGATATTGAGGATATGATAATGGTACTCGAAGCACTTCTAGCTCCAGGATCAGAATTGTGGATGCTTAATGAGGTTACAGAAAAAGAAAGAGAGAAGAAGTTGACTGATGGTGGCCTTGATATCTCAAAACTACAGAACATAAAGCTTGTGCATCGTGTGGGAAATGCTGTTATAAGACGACACCTCCAAGCGCTTCCTTTGGAGTCATTTGATTCGATTTTAATTCTTGCAGATGAATCTTTGGAGGATTCAGTTGTACATTCTGATTCAAGGTGCCTTGCGACATTGCTTCTCATCCGAGATATTCAGTCAAAGCGTCTTCCTTATAAAGACCCAAAATCATCCAATTTAAGGCATCCAGGGTTTTGTCACAGCTCTTGGATTCGCGAAATGCAGCAAGCTTCTGACAAATCAATAATTATTAGTGAAGTCCTGGATTCTCGGACCAGGAACCTGGTGTCTGTTTCAAGAATAAGCGATTATGTATTATCAAATGAGTTAGTGAGTATGGCTCTGGCAATGGTGGCTGAAGACAAGCAAATTAATCGTGTTCTTGAGGAGCTCTTCGCAGAGAAGGGCAATGAGATGTGTATCAAACCAGCAGAGTTCTATCTGTATGACCAGGAAGAAATATCTTTCTATGATGTGATGATTAGAGGTCGACAAAGGCAAGAAATCGTGATAGGTTATCGCCTTGCTGATTCAGATAATGCAGTGATTAATCCTTCAAGGAAAGATGAACCCAGAAAATGGTCTATTGAGGATGTCTTTGTTGTCATCTCTCGGAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61736.p1 GENE.S_Transcript_61736~~S_Transcript_61736.p1 ORF type:complete len:779 (+),score=155.74,Castor_Poll_mid|PF06241.8|5.4e-39,Castor_Poll_mid|PF06241.8|5.7e+03,Castor_Poll_mid|PF06241.8|1.7e+02 S_Transcript_61736:86-2422(+)
MPIPPSPKPTPSPPTKLLERSRPRPLLSKCHSSLCGSPKTRPVFRRLSSSLSSTSNSGPGLGPGSADPELGPETSSVEEAQLKNGCSSALSLVIWVRNWYLFFLLICTCVSSMCYIMSLCKRLAALQGEMVELRRMCKGNDYVDKNNIEAFQCRDDKSAYYFGEADSKTICLYIVFFTLVMPFIVYKYLDYLPRLKSLCLRTENYKEEVPPKKKLAYMVDVCFSVYPYAKLLALLFATVFLIGFGGLALYAVSDNSLVEALWLSWTFVADSGNHADRVGTGPRIVSISISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLSDARALRVVLSLTGVKEGLRGHVAVELSDLDNEPLVKLVGGELVETVVAHDVIGRLMIQCALQPGLAQIWENILGFENAEFYIKRWSELDGSYFEDVFFSFPDAVPCGVKVAAEDGRIIMNPEDDYIIREGDEILVIAEDDDTYAPGPLPKVHKGLFPMIIDPPKYPEKILFCGWRRDIEDMIMVLEALLAPGSELWMLNEVTEKEREKKLTDGGLDISKLQNIKLVHRVGNAVIRRHLQALPLESFDSILILADESLEDSVVHSDSRCLATLLLIRDIQSKRLPYKDPKSSNLRHPGFCHSSWIREMQQASDKSIIISEVLDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEKGNEMCIKPAEFYLYDQEEISFYDVMIRGRQRQEIVIGYRLADSDNAVINPSRKDEPRKWSIEDVFVVISRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST