Transcript Information: S_Transcript_61772.p1


Annotated TAIR IDAT2G41540.1
Annotated Gene Name6-phosphogluconate dehydrogenase family protein
Annotated Gene Symbol(s)GPDHC1
Annotation TypeOrtholog
Chromosome Positionchr2:17326801-17328654 | Forward length=462
E-Value1.4E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.45351980877
Replicate 211.031394778757
Replicate 39.2213680418003
Condition 2: 8 Hour
Replicate 115.857341517868
Replicate 217.304720529019
Replicate 319.539526971233
Condition 3: 24 Hour
Replicate 110.78241044087
Replicate 211.235051892548
Replicate 311.694836828868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61772.p1 GENE.S_Transcript_61772~~S_Transcript_61772.p1 ORF type:complete len:468 (+),score=99.12,NAD_Gly3P_dh_C|PF07479.10|1.2e-22,NAD_Gly3P_dh_N|PF01210.19|0.13,NAD_Gly3P_dh_N|PF01210.19|7.2e-11 S_Transcript_61772:724-2127(+)
ATGGTTGGAGGCAGTGTTATGAATCATACTAGTTCTTATGCAAATGGGTCAGTTCATAATCATCACAATGGCAATGAAGATAAATTAGATGAGCTAAGGAGTTTATTAGGGAAAGCTGATGGTGATCCTTTGAGAATTGTGGGTGTTGGTGCTGGTGCTTGGGGGAGTGTGTTTGCAGCTTTGTTGCAGGATAGTTATGGTCAGTTTCGCGATAAGGTTCAAATACGGATATGGAGGAGGTCTGGAAGAGCGGTTGGCAAAACAACTGCTGAGCATTTGTTTGAAGTGATCAATTCGAGGGAAGATGTGTTGAGGAGATTGATAAGGAGGTGTGCTTATCTCAAGTATGTCGAAGCCAGGCTTGGTGATCGGACGCTTTATGCTGACGAGATATTAAGAGATGGATTTTGCTTGAACATGGTTGATACGCCACTTTGTCCCTTGAAGGTTGTAACCAACCTACAGGAAGCTGTTTGGGATGCTGACATAGTTGTGAATGGGTTGCCTTCAACTGAAACTCGTGAGGTTTTCGAAGAGATCAGCAAGTATTGGAAGGAGAGACTCACAGTTCCGATTATTATCTCTTTGTCAAAGGGTATTGAGGCTGCATTGCATCCTGTTCCCCACATTATCACTCCTACAACGATGATATATCGAGCAACTGAAATTCCCATGGAAAACATTCTTTACCTTGGTGGACCGAACATCGCCTCTGAGATCTACAACAAGGAATATGCAAATGCACGTATATGTGGAGCTGAAAAATGGAGGAAGCATCTGGCAAAGTTTCTAAGGCAGCCCCAATTCATTGTGTGGGACAATAGCGACCTAGTCACTCATGAAGTTATGGGTGGTCTCAAGAACGTATATGCCATTGGAGCTGGAATGGTGGCAGCCCTTACAAATGAAAGTGCTACGAGCAAATCTGTGTATTTTGCTCATTGTACATCGGAGATGATATTTATTACTCATTTGTTGGCCGAAGACCCTGAGAAGCTTTCTGGGCCTTTGCTTGCTGATACATACGTAACATTATTGAAAGGACGTAATGCATGGTATGGACAAATGTTGGCCAAGGGCGGACTTAGCCTTGATATGGGTGATAGCATCAGTGGCAAGGGAATGATACAGGGTGTTTCTGCGGTTGGAGCATTCTACGAACTCTTGAGTCAGTCTTCCCTGAATGTGTCTCGTGGTGGAGGAAGCAAGCCAGTTGCTCCTGTTGAGTTGTGCCCTATTCTGAAGACACTCTACAAGATACTCATAACAAGGGAACAATCCTCAGAAGACATCCTCCAAGCACTGAGGGATGAGAACATGTATGATCCTCGAGATCGGATCGAAATTGCACAAACTCATGCTTTCTACATGCCTTCACTCCTTGGGCAGCCTCTGGATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61772.p1 GENE.S_Transcript_61772~~S_Transcript_61772.p1 ORF type:complete len:468 (+),score=99.12,NAD_Gly3P_dh_C|PF07479.10|1.2e-22,NAD_Gly3P_dh_N|PF01210.19|0.13,NAD_Gly3P_dh_N|PF01210.19|7.2e-11 S_Transcript_61772:724-2127(+)
MVGGSVMNHTSSYANGSVHNHHNGNEDKLDELRSLLGKADGDPLRIVGVGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRSGRAVGKTTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLYADEILRDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERLTVPIIISLSKGIEAALHPVPHIITPTTMIYRATEIPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEDPEKLSGPLLADTYVTLLKGRNAWYGQMLAKGGLSLDMGDSISGKGMIQGVSAVGAFYELLSQSSLNVSRGGGSKPVAPVELCPILKTLYKILITREQSSEDILQALRDENMYDPRDRIEIAQTHAFYMPSLLGQPLDS*

Click here to download the sequence:
Link to NCBI Protein BLAST