Transcript Information: S_Transcript_61778.p3


Annotated TAIR IDAT3G27170.1
Annotated Gene Namechloride channel B
Annotated Gene Symbol(s)CLC-B, ATCLC-B
Annotation TypeOrtholog
Chromosome Positionchr3:10024147-10026921 | Forward length=780
E-Value6.8E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1100.93122276959
Replicate 2128.73872417337
Replicate 3123.60557162413
Condition 2: 8 Hour
Replicate 144.238841615329
Replicate 253.430638506581
Replicate 339.683758839061
Condition 3: 24 Hour
Replicate 1114.68563832562
Replicate 285.471502168246
Replicate 3106.52288966842


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61778.p3 GENE.S_Transcript_61778~~S_Transcript_61778.p3 ORF type:5prime_partial len:188 (+),score=34.72 S_Transcript_61778:3-566(+)
AAAGGGTGCAAAAAGGGAAGACAAACCAAACCAAACCAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAACCAAAAGCACATACAGAGCTTGGGAGAAGTTATGGAAGCAAATGATGGGGAACTGAAACCACCACCATCAAATTACAACAATTCAGAGCCAATGGAAAATTCAAGCCAGTTAGATGAGAGAGAAGCAGAAGGTGAGAATGAAGATGCAGTACCAGATCTTGAAAACAGCTTCCTTGAGCAGCCTTTGCTCAAGAGAAACAGGACACTCTCTGCCAGTCATTTGGCTATGGTGGGTGCCAAGGTTTCTTACATCGAGAGCCTCGATTACGAGATCAACGAGAATGATCTGTTCAGACAAGATTGGAGAAGTCGATCCAAAATCCAAGTGTTGCAGTACATATTTTTGAAATGGAAACTAGCTTTTCTTATTGGACTTCTAACAGGGCTTATTGCCACACTCATCAATCTAGCTGTTGAGAATATTGCCGGCTACAAACTTCTTATTGTTTCTAACTATATTGAGCAGAAAAGGTGCTTCTCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61778.p3 GENE.S_Transcript_61778~~S_Transcript_61778.p3 ORF type:5prime_partial len:188 (+),score=34.72 S_Transcript_61778:3-566(+)
KGCKKGRQTKPNQTKKKKKKKKKKPNQKHIQSLGEVMEANDGELKPPPSNYNNSEPMENSSQLDEREAEGENEDAVPDLENSFLEQPLLKRNRTLSASHLAMVGAKVSYIESLDYEINENDLFRQDWRSRSKIQVLQYIFLKWKLAFLIGLLTGLIATLINLAVENIAGYKLLIVSNYIEQKRCFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST