Transcript Information: S_Transcript_61779.p1


Annotated TAIR IDAT3G27170.1
Annotated Gene Namechloride channel B
Annotated Gene Symbol(s)CLC-B, ATCLC-B
Annotation TypeOrtholog
Chromosome Positionchr3:10024147-10026921 | Forward length=780
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1140.28621687691
Replicate 2155.31396673263
Replicate 3150.91555990361
Condition 2: 8 Hour
Replicate 149.770080145626
Replicate 259.715102085612
Replicate 352.477277259215
Condition 3: 24 Hour
Replicate 1132.33470577991
Replicate 2102.64357346544
Replicate 3129.64745996044


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61779.p1 GENE.S_Transcript_61779~~S_Transcript_61779.p1 ORF type:complete len:656 (+),score=75.24,Voltage_CLC|PF00654.16|8.6e-88,CBS|PF00571.24|1.5e+04,CBS|PF00571.24|1.9,CBS|PF00571.24|0.002 S_Transcript_61779:957-2924(+)
ATGGGGTTGATTATGTTGACAGGGTCGAACTTCATATTGACCCTGATTGCTACTGTCCTCGTCGTTTTCTTTGCTCCAACGGCTGCTGGGCCTGGTATTCCGGAAATTAAAGCTTATCTCAATGGTGTTGACACCCCAAACATGTTTGGTGCCCCGACATTGTTCGTCAAGATAATTGGGAGCATTGGAGCTGTATCTGCTGGCTTAGATCTTGGGAAAGAAGGACCATTGGTGCATATCGGAACCTGCATTGCTTCCTTACTCGGCCAGGGTGGGACAGAAAAGTATCGTCTCAAATGGCGTTGGCTTAGGTACATGAACAATGACAGGGATCGGAGGGATCTCATCACCTGCGGTTCTTCTTCCGGAGTGTGTGCTGCTTTCCGATCCCCAGTAGGAGGTGTCCTCTTTGCTCTAGAAGAAGTCGCAACTTGGTGGAGAAGCGCGCTCCTTTGGAGAACTTTCTTTAGCACGGCAGTTGTGGTTGTGGTGCTTAGGGCTTTCATTGAGTACTGTAGTTCTGGAAGATGTGGGCTCTTTGGCAATGGAGGGCTTATCATGTTTGATGTAAGCAATGTCACTGTGCGCTACCACATGACGGATATTATCCCTGTTGCCATTATAGGTCTAATTGGCGGAGTTCTTGGAAGCCTTTACAACTACCTGCTCCATAAGGTTCTCAGAGTTTATAGTCTTATTAATGAGAAGGGAAAATTAGCAAAGATTCTTCTGAGTCTTACAGTCTCGGTGTTTACCTCTGTGTGCATGTATGGCCTGCCTTTCCTTGTGAGTTGCACGAAATGCGATCCATCCCTTCGCATGTCTGTCTGTCCAACAACCGGAAGGACGGGGAACTTCAAGAAATTCAACTGTCCTGATGGCTACTACAACGACCTTGCCAGTTTACTCTTCTCTACCAACGATGATGCTGTTCGAAATATCTTCTCCACAAATACTCCGAAAGAATTTCACATGTTCCCTCTAGTAATCTACTTTGCACTCTACTGTATCTTGGGACTCTTCACCTTTGGCATTGCTGTCCCGTCTGGACTTTTCCTACCCATTATTCTCATGGGTTCTGCATATGGGCGATTGCTTGGCATTCTTATGGGAAGTTATACAAATATCGACCAAGGGCTTTTTGCTGTACTTGGTGCAGCCTCCCTTATGGCGGGCTCAATGAGGATGACTGTGTCACTTTGCGTCATTTTCCTTGAACTCACTAACAACCTGTTGCTACTCCCCATAACGATGCTTGTGCTTCTCATTGCAAAGTCTGTGGGAGACTGCTTCAATAAGAGTATATACGAGATCATACTCGACCTCAAAGGCCTTCCTTTCTTAGATGCAAATCCCGAGCCATGGATGAGAAATATAACAGTTGGTGACCTTGCTGATGTGAAACCTCCATTAGTTAGTCTTCGTGGTATTGAGAAGGTATCCCGAATTGTGGAAGTGTTGAAGAACACCACACACAACGGTTTCCCTGTCATAGACGACAATACCCTGATAACAGTAGGGCAGGGCAGCACAAGGACAATGGAGCTACATGGATTAATTTTACGAGCACACCTTGTAGCTGTGCTGAAAAAGAAGTGGTTCCTACGAGAGCCCAGAAGAACGGAGGAATGGGAAGTTAGGGAGAAATTTACCTGGGTTGAGCTGGCTGAACGAGACACGAACTTTGAGCAAGTAGCCATATCAAAGCATGAAATGGAGATGTATGTTGATCTGCACCCTTTCACCAACAAAACTCCTTATACCGTGGTTGAAGACATGTCAGCTGCTAAGGCAATGGTGCTCTTCAGGCAAGTTGCCCTTCGCCATTTGCTCGTTGTACCAAAGTATCAAGGAGCTGGGATATATCCTGTACTTGGAATCTTAACAAGGCAAGATTTGAGGGCCCACAATATCCAGAGTGTGTTCCCTCACCTAGCAAAGTCGAAGGGACGGGAAAAACAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61779.p1 GENE.S_Transcript_61779~~S_Transcript_61779.p1 ORF type:complete len:656 (+),score=75.24,Voltage_CLC|PF00654.16|8.6e-88,CBS|PF00571.24|1.5e+04,CBS|PF00571.24|1.9,CBS|PF00571.24|0.002 S_Transcript_61779:957-2924(+)
MGLIMLTGSNFILTLIATVLVVFFAPTAAGPGIPEIKAYLNGVDTPNMFGAPTLFVKIIGSIGAVSAGLDLGKEGPLVHIGTCIASLLGQGGTEKYRLKWRWLRYMNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEYCSSGRCGLFGNGGLIMFDVSNVTVRYHMTDIIPVAIIGLIGGVLGSLYNYLLHKVLRVYSLINEKGKLAKILLSLTVSVFTSVCMYGLPFLVSCTKCDPSLRMSVCPTTGRTGNFKKFNCPDGYYNDLASLLFSTNDDAVRNIFSTNTPKEFHMFPLVIYFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGILMGSYTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKSVGDCFNKSIYEIILDLKGLPFLDANPEPWMRNITVGDLADVKPPLVSLRGIEKVSRIVEVLKNTTHNGFPVIDDNTLITVGQGSTRTMELHGLILRAHLVAVLKKKWFLREPRRTEEWEVREKFTWVELAERDTNFEQVAISKHEMEMYVDLHPFTNKTPYTVVEDMSAAKAMVLFRQVALRHLLVVPKYQGAGIYPVLGILTRQDLRAHNIQSVFPHLAKSKGREKQR*

Click here to download the sequence:
Link to NCBI Protein BLAST