Transcript Information: S_Transcript_61795.p1


Annotated TAIR IDAT5G40890.1
Annotated Gene Namechloride channel A
Annotated Gene Symbol(s)ATCLC-A, CLC-A, CLCA, ATCLCA
Annotation TypeOrtholog
Chromosome Positionchr5:16381645-16384999 | Reverse length=775
E-Value1.2E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.031939754613
Replicate 261.976002424323
Replicate 364.985368733141
Condition 2: 8 Hour
Replicate 120.7610132577
Replicate 224.359517611498
Replicate 321.074079957288
Condition 3: 24 Hour
Replicate 153.972141251808
Replicate 236.373489656558
Replicate 349.824265412753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61795.p1 GENE.S_Transcript_61795~~S_Transcript_61795.p1 ORF type:3prime_partial len:529 (+),score=68.08,Voltage_CLC|PF00654.16|88,Voltage_CLC|PF00654.16|8.4e-72 S_Transcript_61795:127-1710(+)
ATGGAAGCAAATGATGGGGAACTGAAACCACCACCATCAAATTACAACAATTCAGAGCCAATGGAAAATTCAAGCCAGTTAGATGAGAGAGAAGCAGAAGGTGAGAATGAAGATGCAGTACCAGATCTTGAAAACAGCTTCCTTGAGCAGCCTTTGCTCAAGAGAAACAGGACACTCTCTGCCAGTCATTTGGCTATGGTGGGTGCCAAGGTTTCTTACATCGAGAGCCTCGATTACGAGATCAACGAGAATGATCTGTTCAGACAAGATTGGAGAAGTCGATCCAAAATCCAAGTGTTGCAGTACATATTTTTGAAATGGAAACTAGCTTTTCTTATTGGACTTCTAACAGGGCTTATTGCCACACTCATCAATCTAGCTGTTGAGAATATTGCCGGCTACAAACTTCTTATTGTTTCTAACTATATTGAGCAGAAAAGGTATGTGATGGGGTTGATTATGTTGACAGGGTCGAACTTCATATTGACCCTGATTGCTACTGTCCTCGTCGTTTTCTTTGCTCCAACGGCTGCTGGGCCTGGTATTCCGGAAATTAAAGCTTATCTCAATGGTGTTGACACCCCAAACATGTTTGGTGCCCCGACATTGTTCGTCAAGATAATTGGGAGCATTGGAGCTGTATCTGCTGGCTTAGATCTTGGGAAAGAAGGACCATTGGTGCATATCGGAACCTGCATTGCTTCCTTACTCGGCCAGGGTGGGACAGAAAAGTATCGTCTCAAATGGCGTTGGCTTAGGTACATGAACAATGACAGGGATCGGAGGGATCTCATCACCTGCGGTTCTTCTTCCGGAGTGTGTGCTGCTTTCCGATCCCCAGTAGGAGGTGTCCTCTTTGCTCTAGAAGAAGTCGCAACTTGGTGGAGAAGCGCGCTCCTTTGGAGAACTTTCTTTAGCACGGCAGTTGTGGTTGTGGTGCTTAGGGCTTTCATTGAGTACTGTAGTTCTGGAAGATGTGGGCTCTTTGGCAATGGAGGGCTTATCATGTTTGATGTAAGCAATGTCACTGTGCGCTACCACATGACGGATATTATCCCTGTTGCCATTATAGGTCTAATTGGCGGAGTTCTTGGAAGCCTTTACAACTACCTGCTCCATAAGGTTCTCAGAGTTTATAGTCTTATTAATGAGAAGGGAAAATTAGCAAAGATTCTTCTGAGTCTTACAGTCTCGGTGTTTACCTCTGTGTGCATGTATGGCCTGCCTTTCCTTGTGAGTTGCACGAAATGCGATCCATCCCTTCGCATGTCTGTCTGTCCAACAACCGGAAGGACGGGGAACTTCAAGAAATTCAACTGTCCTGATGGCTACTACAACGACCTTGCCAGTTTACTCTTCTCTACCAACGATGATGCTGTTCGAAATATCTTCTCCACAAATACTCCGAAAGAATTTCACATGTTCCCTCTAGTAATCTACTTTGCACTCTACTGTATCTTGGGACTCTTCACCTTTGGCATTGCTGTCCCGTCTGGACTTTTCCTACCCATTATTCTCATGGGTTCTGCATATGGGCGATTGCTTGGCATTCTTATGGGAAGTTATACAAATATCGACCAAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61795.p1 GENE.S_Transcript_61795~~S_Transcript_61795.p1 ORF type:3prime_partial len:529 (+),score=68.08,Voltage_CLC|PF00654.16|88,Voltage_CLC|PF00654.16|8.4e-72 S_Transcript_61795:127-1710(+)
MEANDGELKPPPSNYNNSEPMENSSQLDEREAEGENEDAVPDLENSFLEQPLLKRNRTLSASHLAMVGAKVSYIESLDYEINENDLFRQDWRSRSKIQVLQYIFLKWKLAFLIGLLTGLIATLINLAVENIAGYKLLIVSNYIEQKRYVMGLIMLTGSNFILTLIATVLVVFFAPTAAGPGIPEIKAYLNGVDTPNMFGAPTLFVKIIGSIGAVSAGLDLGKEGPLVHIGTCIASLLGQGGTEKYRLKWRWLRYMNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEYCSSGRCGLFGNGGLIMFDVSNVTVRYHMTDIIPVAIIGLIGGVLGSLYNYLLHKVLRVYSLINEKGKLAKILLSLTVSVFTSVCMYGLPFLVSCTKCDPSLRMSVCPTTGRTGNFKKFNCPDGYYNDLASLLFSTNDDAVRNIFSTNTPKEFHMFPLVIYFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGILMGSYTNIDQG

Click here to download the sequence:
Link to NCBI Protein BLAST