Transcript Information: S_Transcript_61892.p1


Annotated TAIR IDAT1G54350.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20286917-20290245 | Forward length=706
E-Value1.5E-306
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.29629666185
Replicate 223.20742195998
Replicate 324.949122873146
Condition 2: 8 Hour
Replicate 117.425416212443
Replicate 217.961315574566
Replicate 318.634087270762
Condition 3: 24 Hour
Replicate 125.783195818989
Replicate 227.249485513974
Replicate 326.759574997905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61892.p1 GENE.S_Transcript_61892~~S_Transcript_61892.p1 ORF type:complete len:771 (+),score=119.97,ABC_membrane_2|PF06472.11|5e-61,SbmA_BacA|PF05992.8|2.9e-18,ABC_tran|PF00005.23|4.2e+02,ABC_tran|PF00005.23|1.3e-17,ABC_membrane|PF00664.19|2.4e-09 S_Transcript_61892:122-2314(+)
ATGGTACCAGCTGATACTTCAACAACCTCTGTATTCACCAAATGCTACCAATTTATCCCAATGTCTCTTCATAATAGAAGGAGAAAAAATCCAACCTTACCCATCCAACCAAAAAACCCGCTCAAACATCCTTCTTCTTTGCAGTTTTCAAATACCCATTTGCCCAATTTCAAATCCCAGAAACGGATTCTCAATTTAAAGGCTTCATCTTCCACTACTCCAACTTCAGATAATAGAGAATTACCTGATATTAAGACGTTATTGAGGAGGTTTTGGAAAGTGGCAAAACCATATTGGTCATCAGAAGATAAGGTTCAAGCTAGATTGAGATTGGCTGCTGTTTTTGCCTTGACATTGGGAACTACTGGGATTAGCGTTGCCTTTAATTTCCTTGGCCGTGATTTTTACAATGCTCTTGCCAACAAAGATCAAGAACAATTCATGAAGCAGCTACTATACTATCTTGGTGGATTTGCAGGTGGTATTCTGGTTTTTGTGTTGAGAGATTATGCAAAAGACACTCTTTCTTTGAGATGGAGGTCTTGGATGACCACCTATTATATGCAGCGCTACTTAAAAGATAGGACGTTCTACAAAATTCAGTCCCAGTCTACAATTGATAATCCAGATCAAAGGATTGTTGATGATTTGAGTTCATTCACAGGAACAGCGCTTGCCTTTTCCCTGACAATCTTTAATGCTGCAGTAGACTTGATATCCTTCAGTAACATCCTATTTGGCATCTATCCTCCACTATTTGTTGTGCTTTTGGCATATTCGATAGGTGGGACAGCTATAAGCGTATATCTTGGAAAGGGGCTGGTAACTTTGAATTTCTTGCAAGAGAAGAAAGAAGCTGACTTCCGTTATGGACTTGTACGTGTGAGGGAAAATGCTGAATCAATTGCATTTTATGGCGGCGAGGAAAATGAAATGCAAATGCTAGTCCAGAGGTTCAGCAGTGCTTATCAGAATTTAATGCGTTTGTTGATATCTTCAAGAAATTTGGAGTTCTTCACCAGTGGCTACCGATATTTGATACAGATTCTTCCTGCAGCACTTGTTGCTCCCATGTATTTTTCAGGAAAGATTGAATTCGGCGTCATTAATCAGTCTGTATCGGCTTTTAATCACATCCTTGGTGATGTTTCCCTCATTGTTTACCAGTTTCAGGCAATCAGTGCCTTCTCTGCCGTGATTGACCGTTTAGGTGAATTTGATGATATTCTCGATAACAACTCAGAGAATCTGTCTGATCCTATGGAGAAGGTTTCTCTAGTGTACTCCAGTGTGATGAGTCCATCAAGTCTTACTCTTTTGGATGCCAATGGTTCAATGACAGTGGAAAACAGCAAAAAGTTGGTCGATATAGAGAATTTAACACTGGTGACTCCTGAGAAAGCTACTCTCCTAATAAACTTAACTTTGTCAATAAATGAAAAGGATCACCTGTTGATAACTGGGCCAAGTGGGGCTGGTAAGACATCCTTGTTAAGAGCTATGGCTGGTCTCTGGAGCTCTGGAAGAGGGAAAATCACATTTTATGTCAAAGATTCAGATGAGTTACAGCCAAGTAGACCTGAAAATGCTGAAGCACATAAATCATACAGGAATAGAGATGGCATATTTTTCCTTCCCCAAAAGCCATATATGGTCTTGGGAACTCTACGTCAACAATTGCTTTATCCCATGTGGGCAGAAACCGTGACATCAGAGGGTCTTGAACAAACTGATTGTCCCCCTTTCTTGATGCGCCTTGAGGACGCTACTGATATGGCTGCAAGGCCTGGGAAGCCCACTAGTGAGGAATTAGTAAAGGTCCTACAGGATGTTCGCCTTGGTTATTTGTTGCCTCGGTTCGGTCTTGATTCAATATGCGAATGGTCAAGTATTCTTTCCCTGGGTGAGCAGCAACGCCTTGCCTTTGCACGTCTGCTACTAGCGAAACCATATCTGATTCTGATGGATGAATCAACCAGCGCTCTGGATGAGGATAATGAGGCTCATCTATACCGTCTGGTCGAAGCTGCTGGTGTAACTTATGTTAGCATAGGCCACAGAAGATCACTATTTAACTACCACAGCAAAGTTTTGCATATAAGGAAAAAGGATTCAGAATCTACCGAACTCAACTGGTACGTGAAGCCCATAGATCAAGAAACCGGAAGCAGCTTAGTGGAACTGGGTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61892.p1 GENE.S_Transcript_61892~~S_Transcript_61892.p1 ORF type:complete len:771 (+),score=119.97,ABC_membrane_2|PF06472.11|5e-61,SbmA_BacA|PF05992.8|2.9e-18,ABC_tran|PF00005.23|4.2e+02,ABC_tran|PF00005.23|1.3e-17,ABC_membrane|PF00664.19|2.4e-09 S_Transcript_61892:122-2314(+)
MVPADTSTTSVFTKCYQFIPMSLHNRRRKNPTLPIQPKNPLKHPSSLQFSNTHLPNFKSQKRILNLKASSSTTPTSDNRELPDIKTLLRRFWKVAKPYWSSEDKVQARLRLAAVFALTLGTTGISVAFNFLGRDFYNALANKDQEQFMKQLLYYLGGFAGGILVFVLRDYAKDTLSLRWRSWMTTYYMQRYLKDRTFYKIQSQSTIDNPDQRIVDDLSSFTGTALAFSLTIFNAAVDLISFSNILFGIYPPLFVVLLAYSIGGTAISVYLGKGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEENEMQMLVQRFSSAYQNLMRLLISSRNLEFFTSGYRYLIQILPAALVAPMYFSGKIEFGVINQSVSAFNHILGDVSLIVYQFQAISAFSAVIDRLGEFDDILDNNSENLSDPMEKVSLVYSSVMSPSSLTLLDANGSMTVENSKKLVDIENLTLVTPEKATLLINLTLSINEKDHLLITGPSGAGKTSLLRAMAGLWSSGRGKITFYVKDSDELQPSRPENAEAHKSYRNRDGIFFLPQKPYMVLGTLRQQLLYPMWAETVTSEGLEQTDCPPFLMRLEDATDMAARPGKPTSEELVKVLQDVRLGYLLPRFGLDSICEWSSILSLGEQQRLAFARLLLAKPYLILMDESTSALDEDNEAHLYRLVEAAGVTYVSIGHRRSLFNYHSKVLHIRKKDSESTELNWYVKPIDQETGSSLVELGS*

Click here to download the sequence:
Link to NCBI Protein BLAST