Transcript Information: S_Transcript_61913.p1


Annotated TAIR IDAT1G77470.1
Annotated Gene Namereplication factor C subunit 3
Annotated Gene Symbol(s)RFC3, RFC5
Annotation TypeOrtholog
Chromosome Positionchr1:29112194-29114323 | Reverse length=369
E-Value1.4E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.05994856527
Replicate 29.8566228672534
Replicate 39.8201581743847
Condition 2: 8 Hour
Replicate 115.398593527696
Replicate 216.09610928105
Replicate 316.166824677025
Condition 3: 24 Hour
Replicate 16.9790147255664
Replicate 27.4172474249864
Replicate 37.4683456160603


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61913.p1 GENE.S_Transcript_61913~~S_Transcript_61913.p1 ORF type:complete len:385 (+),score=44.11,Rep_fac_C|PF08542.7|2.6e-17,AAA|PF00004.25|2.7e-16,DNA_pol3_delta2|PF13177.2|2.5e-11,Rad17|PF03215.11|9.9e-09,AAA_19|PF13245.2|1.1e-05,AAA_19|PF13245.2|6.2e+03,AAA_16|PF13191.2|1.1e-05 S_Transcript_61913:91-1155(+)
ATGGCGGAAACAACCACTCCAATGGACGTCGACCACAAACCCGTCAACAACAAAGGCAAAAACGTCGTCGTTCCAGGCGACGGCCGGGCCACACCTTGGGTCGAAAAATATCGGCCTCAATCCCTAGCCGACGTTGCTGCCCATCGCGACATCGTCGACACAATTGATAGGTTGACGAGCGAGAACAAGTTGCCGCATTTGCTGCTGTACGGACCTCCAGGAACTGGAAAAACATCGACAATTCTAGCGGTTGCGAGGAAGCTTTATGGGAATCAGTTTCATAATATGATTTTAGAGCTCAATGCTTCGGATGATCGTGGTATCGATGTCGTTAGGCAACAGATTCAGGACTTTGCTAGCACTCAAAGCTTCTCTTTTGGGTCAAAGTCACATGTAAAATTAGTTTTACTGGATGAGGCAGATGCCATGACAAAGGATGCGCAGTTTGCTTTACGTCGAGTGATTGAAAAATACACAAAAAACACAAGATTTGCTCTTATCTGCAACAATGTTAACAAGATCATCCCCGCTCTGCAGTCAAGGTGCACACGCTTCCGGTTTGCTCCTCTTGATTCTGTCCATGTCAATGAGCGGCTGAAACATGTCATAGAAGCAGAAGGGCTTGATGTAACGGAGACTGGCTTAGCAGCACTTGTGAGGTTGAGCACTGGTGACATGAGGAAGGCTTTGAATATTTTGCAGTCAACCCATATGGCATCTCAACAAATTACAGAAGAAGCAGTTTACCTTTGCACTGGAAATCCATTGCCTAAGGACATTGAGCAGATATCATATTGGCTCCTCAATGAGACCTTTGCGACTAGTTTTAGCCGAATTTCTGAAATTAAGACAAGGAAGGGATTGGCCTTGGTAGACATCATAAGAGAAGTAACAATGTTCGTTTTTAGGATCAGGATGCCAGCAGATGTTCGGGTCCAACTGATTAACAATTTGGCTGATATAGAGTACAGGCTCACCTTTGGATGTAACGATAAATTGCAGCTTGGAGCTCTAATAGCTTCATTTACAAAGACTCGGTCTGCATTGGTTGCAGCTGCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61913.p1 GENE.S_Transcript_61913~~S_Transcript_61913.p1 ORF type:complete len:385 (+),score=44.11,Rep_fac_C|PF08542.7|2.6e-17,AAA|PF00004.25|2.7e-16,DNA_pol3_delta2|PF13177.2|2.5e-11,Rad17|PF03215.11|9.9e-09,AAA_19|PF13245.2|1.1e-05,AAA_19|PF13245.2|6.2e+03,AAA_16|PF13191.2|1.1e-05 S_Transcript_61913:91-1155(+)
MAETTTPMDVDHKPVNNKGKNVVVPGDGRATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDSVHVNERLKHVIEAEGLDVTETGLAALVRLSTGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSRISEIKTRKGLALVDIIREVTMFVFRIRMPADVRVQLINNLADIEYRLTFGCNDKLQLGALIASFTKTRSALVAAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST