Transcript Information: S_Transcript_61944.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeOrtholog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value3.8E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.001941733513
Replicate 210.295968460174
Replicate 310.125423732173
Condition 2: 8 Hour
Replicate 111.373541502471
Replicate 212.107118087381
Replicate 312.120776089107
Condition 3: 24 Hour
Replicate 18.3952885571695
Replicate 212.620632328789
Replicate 312.36374725741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61944.p1 GENE.S_Transcript_61944~~S_Transcript_61944.p1 ORF type:complete len:255 (+),score=72.22,Rho_GDI|PF02115.13|2.5e+03,Rho_GDI|PF02115.13|2.8e-80 S_Transcript_61944:573-1337(+)
ATGTCTTTGGCCATTGGGGGGGTGTCAAGCTCTAAAAGCATGGGTCTTGATGAGAACAACAACAACAAGCAACAAGAACCTTCTTCTGAGATTTTAACTGGTACTACTTCTAAAGATCAGCAAGAGCTTGTTCTTAATGAGCCTACAAAAGATAAACTTTCTAGGCAAATGAGTGAGGATTCTATTCTTACTACTGAAGATGATGATGATGAAGAGACTGAGAGGAAAATTGATTTGGGTCCTCAATGCTCTTTGAAGGAACAATTAGAGAAAGACAAGGATGATGAGAGTTTGAGGAAGTGGAAAGAGCAGCTTCTTGGCAGTGTGGACCTTAATGCAATTGGAGAAACTCTTGAACCGGAGGTGAAAATTTTGAGTCTAGCTATAAAATCCCCTGGTAGGGATGATTTTTTGCTTCAAATTCCTGAGAATGGGAAGGTGAAGGGCAATTGGTTTACCTTGAAAGAAGGTAGCCGTTACAGCCTCAAGTTTACCTTTCAGGTCAAGAATAACATAGTTGCGGGGCTTAAGTACACGAACACAGTTTGGAAAACTGCAGTCAAAGTCGATAGCACCAAAGAAATGCTCGGAACTTTTAGCCCTCAAGCAGAGCCATACACACATGAAATGCCTGAGGAGACCACCCCATCAGGCATTTTCGCGAGAGGATCTTATTCGGCTAGGACAAGGTTTGTTGATGACGACAACAAGTGCTACTTGGAGATTAACTATGGATTTGACATTCGTAAGGATTGGCAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61944.p1 GENE.S_Transcript_61944~~S_Transcript_61944.p1 ORF type:complete len:255 (+),score=72.22,Rho_GDI|PF02115.13|2.5e+03,Rho_GDI|PF02115.13|2.8e-80 S_Transcript_61944:573-1337(+)
MSLAIGGVSSSKSMGLDENNNNKQQEPSSEILTGTTSKDQQELVLNEPTKDKLSRQMSEDSILTTEDDDDEETERKIDLGPQCSLKEQLEKDKDDESLRKWKEQLLGSVDLNAIGETLEPEVKILSLAIKSPGRDDFLLQIPENGKVKGNWFTLKEGSRYSLKFTFQVKNNIVAGLKYTNTVWKTAVKVDSTKEMLGTFSPQAEPYTHEMPEETTPSGIFARGSYSARTRFVDDDNKCYLEINYGFDIRKDWQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST