Transcript Information: S_Transcript_61947.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeOrtholog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value1.1E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.509592844466
Replicate 29.1342759314552
Replicate 36.2258917989225
Condition 2: 8 Hour
Replicate 16.9273560902789
Replicate 27.6947759652563
Replicate 36.1096378485615
Condition 3: 24 Hour
Replicate 16.6786904939396
Replicate 27.3621298751192
Replicate 36.2653486101881


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_61947.p1 GENE.S_Transcript_61947~~S_Transcript_61947.p1 ORF type:5prime_partial len:157 (-),score=27.55,Rho_GDI|PF02115.13|3.4e-60 S_Transcript_61947:268-738(-)
TGGAAGGGTTTAGCAAATGATGGTATTGTTGCGGGCCTTAATGCAATTGGAGAAACTCTTGAACCGGAGGTGAAAATTTTGAGTCTAGCTATAAAATCCCCTGGTAGGGATGATATATTGCTTCAAATTCCTGAGAATGGGAAGGTGAAGGGCAATTGGTTTACCTTGAAAGAAGGTAGCCGTTACAGCCTCAAGTTTACCTTTCAGGTCAAGAATAACATAGTTGCGGGGCTTAAGTACACGAACACAGTTTGGAAAACTGCAGTCAAAGTCGATAGCACCAAAGAAATGCTCGGAACTTTTAGCCCTCAAGCAGAGCCATACACACATGAAATGCCTGAGGAGACCACCCCATCAGGCATTTTCGCGAGAGGATCTTATTCGGCTAGGACAAGGTTTGTTGATGACGACAACAAGTGCTACTTGGAGATTAACTATGGATTTGACATTCGTAAGGATTGGCAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_61947.p1 GENE.S_Transcript_61947~~S_Transcript_61947.p1 ORF type:5prime_partial len:157 (-),score=27.55,Rho_GDI|PF02115.13|3.4e-60 S_Transcript_61947:268-738(-)
WKGLANDGIVAGLNAIGETLEPEVKILSLAIKSPGRDDILLQIPENGKVKGNWFTLKEGSRYSLKFTFQVKNNIVAGLKYTNTVWKTAVKVDSTKEMLGTFSPQAEPYTHEMPEETTPSGIFARGSYSARTRFVDDDNKCYLEINYGFDIRKDWQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST