Transcript Information: S_Transcript_6196.p1


Annotated TAIR IDAT1G35530.2
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:13089994-13097078 | Forward length=1390
E-Value9.3E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3881028266554
Replicate 22.763511628354
Replicate 32.272205677651
Condition 2: 8 Hour
Replicate 13.1090404774465
Replicate 23.1237899538017
Replicate 34.0268130999143
Condition 3: 24 Hour
Replicate 12.556793344895
Replicate 22.7457184455944
Replicate 32.8484855077647


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6196.p1 GENE.S_Transcript_6196~~S_Transcript_6196.p1 ORF type:complete len:487 (+),score=93.69,Helicase_C|PF00271.27|9.6e+03,Helicase_C|PF00271.27|2.2e-20,Helicase_C|PF00271.27|3e+03 S_Transcript_6196:892-2352(+)
ATGACAGGTCTAGTAAGTCCTCCGAAGAGAGCATCATTATGGAAATCAAAGCGAGTTTTCTTTGTCACACCACAAGTGCTTGAGAAGGATATTAAGTCAGGAGCATGCCTGGTGAAGTATTTGGTGTGTCTGGTAATTGATGAAGCTCATCGTGCAATGGGTAACTATTCCTATTGCATGGCAGTTCGCGAGTTAATGGCTGTTCCTGTTGATTTGAGAATATTAGCTTTGACGGCTACACCTGGATCAAAGCAGCAAACCATCCAGCAGGTCATTGATAACTTGCAAATATCAACTCTTGAATATCGCAACGAATCTGATCATGATGTTTGCCCATATGTCCATGATAGGAAGATTGAATTAATAGAGGTTCCAATGGGAAAAGCTGCTGTTGAGATAAATAATCTGCTTGTTGATGTTATACGGCCGATTGCTGGAAGACTTTCTGCAATGGGATTGCTTCCATGTAGGGATTTCCAGACATTGAGTCCTTGTGACTTGCTGAGTTCAAGGGACAAGTTTCGTCAAGCACCACCACCAGAACTTTCCCATATGAAGTACAGTGAAGTGGAAGCTTTTTATGGTGTTCTTATTACACTTTACCACATCCGCAAACTACTCTCAAGCCATGGAATAAGGCCAGCTCACGAGATGCTTGAAGAAAAGTTACGACAAGGGTATTTTGCAAGATTTATGAGTAAAAATGAATATATTCGGAAAGCAAAACTCCTCATGCCGCAGAGTTTGTCACATGGTGCCCCTAGTCCAAAGCTGTCAAAAATGATAGAAATATTAGTTGATCACTTCAAAAAAAATGATCCTCAGAACTCAAGGGTTATCATTTTCTCAAATTTTAGGGGAAGCGTCAGGGACATTTTGGATTCATTGGCTAGCATTGGGAGTTCCGTTCAAGCAACTCAATTCATTGGTCAAAGCTCAGGAAAGGCACTGAAAGGGCAGACACAAAAGGTGCAACAGGCTGTGCTAGAGAAATTTCGAATGGGTGGATACAATGTTATTGTTGCCACTTCAATTGGTGAAGAAGGGCTTGATATTATGGAAGTTGATCTTGTGATATGTTTTGATGCCAATATTTCACCCCTCAGAATGATTCAGCGGATGGGGAGAACTGGAAGGAAACATGATGGTCGAGTTGTTGTTTTAGCATGTGAGGGTACAGAACTCAAGGGTTATATGCGGAAGCAAGCAACAGGTAGGACTGTGAGAAAGCACTTGCAAAATGGGGGCATGAATAGCTTCAATTTTCATTCCAGTCCGAGGATGGCCTTTCCCTCCAGAGTGCACAGAGTAATGCATTCACCTAAAACTGGGTGGCTTATTGATGTGATGCAACTTCTGCAAGTTTTGCCAAGTAGCAGAACATGTGGTGTTGATTCTTCTTGTTGTCACTGCTCAGCAATTGGGAACATTGAGCATGTTGAAAGCGGACAAAGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6196.p1 GENE.S_Transcript_6196~~S_Transcript_6196.p1 ORF type:complete len:487 (+),score=93.69,Helicase_C|PF00271.27|9.6e+03,Helicase_C|PF00271.27|2.2e-20,Helicase_C|PF00271.27|3e+03 S_Transcript_6196:892-2352(+)
MTGLVSPPKRASLWKSKRVFFVTPQVLEKDIKSGACLVKYLVCLVIDEAHRAMGNYSYCMAVRELMAVPVDLRILALTATPGSKQQTIQQVIDNLQISTLEYRNESDHDVCPYVHDRKIELIEVPMGKAAVEINNLLVDVIRPIAGRLSAMGLLPCRDFQTLSPCDLLSSRDKFRQAPPPELSHMKYSEVEAFYGVLITLYHIRKLLSSHGIRPAHEMLEEKLRQGYFARFMSKNEYIRKAKLLMPQSLSHGAPSPKLSKMIEILVDHFKKNDPQNSRVIIFSNFRGSVRDILDSLASIGSSVQATQFIGQSSGKALKGQTQKVQQAVLEKFRMGGYNVIVATSIGEEGLDIMEVDLVICFDANISPLRMIQRMGRTGRKHDGRVVVLACEGTELKGYMRKQATGRTVRKHLQNGGMNSFNFHSSPRMAFPSRVHRVMHSPKTGWLIDVMQLLQVLPSSRTCGVDSSCCHCSAIGNIEHVESGQRY*

Click here to download the sequence:
Link to NCBI Protein BLAST