Transcript Information: S_Transcript_62214.p1


Annotated TAIR IDAT2G19280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8362672-8364753 | Forward length=693
E-Value6.5E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0442419156469
Replicate 23.5149821201162
Replicate 34.2761962754294
Condition 2: 8 Hour
Replicate 13.1548230341136
Replicate 23.4687503580799
Replicate 33.062447522195
Condition 3: 24 Hour
Replicate 14.5678490371513
Replicate 22.8692449933071
Replicate 32.5831965820318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62214.p1 GENE.S_Transcript_62214~~S_Transcript_62214.p1 ORF type:complete len:703 (+),score=99.75,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|9.3e-11,PPR_2|PF13041.2|4.8e-14,PPR_2|PF13041.2|4e-13,PPR_2|PF13041.2|5.4e-06,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|2.6e-13,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|9.8e-15,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|9.8e-08,PPR_1|PF12854.3|7.4e-08,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|2.6e-06,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|0.26,PPR|PF01535.16|0.043,PPR|PF01535.16|61,PPR|PF01535.16|0.043,PPR|PF01535.16|0.00082,PPR|PF01535.16|0.037,PPR|PF01535.16|0.0003,PPR|PF01535.16|2e-07,PPR|PF01535.16|5e-05,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0009,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|1.1e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|4.8e+03,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|0.0086,ATP13|PF12921.3|3.3,ATP13|PF12921.3|2.8e+02,ATP13|PF12921.3|9.6e+02,ATP13|PF12921.3|1e+03,ATP13|PF12921.3|43,ECSIT|PF06239.7|1.6e+03,ECSIT|PF06239.7|5,ECSIT|PF06239.7|4.2e+02,ECSIT|PF06239.7|9.7e+02,ECSIT|PF06239.7|1.2,ECSIT|PF06239.7|3.9 S_Transcript_62214:184-2292(+)
ATGAAGGGCAAGTTTTCATTGATAAATGGGTTCACTGTTGGTTTTAATGTGGTGTTAAAGAGAAACAACTTAAGTAGGTATTTCTATTCTGTCAATTCTGCATTGCCTGCCTTACATTCTTCTGAGGATGAAACTCCATTTCTTGATGATGTCAATAGTTCATATTGTGTTTCGGTCGAACAGATTAGTAGACCATGTGTGGGTAATAGATATGTCACCAATGAGTCTAGGTTTCTTAGCTCTTCACCAATGAAGAATTCGGGACGGTACATTGATGGAATGGGAATGATTATGTCAATACTTGTAAAGCAAGGATGGAGGTTAAATGATCTGGGTTGTAGTTGTTGTGGTGTTGAGTTACATGAGGAACATGTAGTCGCTGCTCTTAATGGCGTGTTCGTTGAAACGGGAAGTGCTGAACTCACCTTGCATTTCTTCCGATGGTCAGAAGGTAGTCTAGGGTTGAAGCATACAGTAAGATCCATTTGTACATTGATTAACGTATTGGTTCTTGGGAACATGAATTACAGAGTAGTGGATTTTCTCAAGTTTCTTGTACACGGTCATCCGCATTGTGTACAGTCCGAGGAGTTGGTAAAACTTCTCCGTGAAGTTTGTACGAGAAAGGTGTTAGAAACTGTATATAGCATGCTTGTTGATTGTTATACTAAGGAAAACATGGTGGATGAAGCTCTTCAAGCAATAGGTTTTATTGAGGAATTCGGCATCTTTCCCACAGCTGGGGTGTGTAATAAAGTTCTCAAGTCCTTGTTAGATTCAAACCGGGCAGAATTGGGTTGGGACTTGGTAGAAAAAATGCTGGAAAGGGGTTTGGTGAGCACGGCCATCATCAGCTTGTTCATCTCTTACTACTGCAGAAGAGGAGATCTTGATTGTGGATGGAAATTATTGATCGATATGAAAAAGTATGGACTTAAACCAGATGTTGTAGCATATACGACTTTCATTCATTTTCTTTGTAAGGAGTCCTATTTAAAAGAAGCTACTTCATTGGTCTTTAAAATGGTTGAGATGGGCATCTCTCCTGATTCAGTTTTGTTGACTTCAGTAATCTATGGTTATTGCAAAATGGGTCGACCAGAAGATGGTGTTAGTATTATTAGGCTATTTAACATCTACCCCAATGTTTTTGTGTATACCAGCTTCATCTCAAAGTTGTGCAAAGATAGTAACATGCAGAAGGCTTCGACCATTTTCCATGAGATGACAGCCTCTGGGATTCTTCCTGATTCTTTTGTTTATACCACAATGATTGATGGATACTGTAAAGTAAGAAAAATAAGTAAAGCTCTTCAATACTTGGGAAGAATGTTGAAGGATGGTATGGAACCATCTGTCGCCACATGCACAACACTAATCAATAGTAACTGCAGGATTGGGGACATGGAAGTTGCTCAGCGTCTGCTCGAAAAGATGATAGGAAAAGGGTTGCTACCAGATATTGTTGCATATAACACCATAATTAACGGATATAAGAATAAAGGTGACTTGCAAAAGGCTTATGAGCTACTGGATATGATGAAATCTTTTGGAGTTTCACCTGATATTGTAACATATAACACAATTATACATGGATTAGTAATGAAAGGATATGTGGCTGAGGCAAATGATATGTTGAATGAGCTCATCCGAAGGGGCTTTTCTCCTGATGTAATAACATTCAGCACTGTCATTGGTGGTTACTCAAATAAGGGGCAGTTTGCTGAGGCCTTCCTGATGTGGTGCCAGATGAGCGACTGCAATGTCAGACCTGATGTCATAACATGTAGTGCTCTTATTAGTGGGTTTTGCAGAGCACACCGCATTGACGAAGCTCGTGCATTGTTTCAAAAGATGCAAGGTTTTGGTTTGAATCCTGATCTGATATTGTACAACACTCTCATTCATGGATTTTGTAGATCAGGAAATATGGAAGAAGCATACCAGTTGATAACTTTGATGATTGAAGATGGTATTGTTCCAGATGAGGTCACTTACAGGGCACTCATTCTTGGATTTGAGAAGAATTTTGCGAGAAATCCTATGGAAAGTGCCTTTCATAAGATGCAAGAACTAGTCCAGAGATATGATCTGTATGTTGCAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62214.p1 GENE.S_Transcript_62214~~S_Transcript_62214.p1 ORF type:complete len:703 (+),score=99.75,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|9.3e-11,PPR_2|PF13041.2|4.8e-14,PPR_2|PF13041.2|4e-13,PPR_2|PF13041.2|5.4e-06,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|2.6e-13,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|9.8e-15,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|9.8e-08,PPR_1|PF12854.3|7.4e-08,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|2.6e-06,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|0.26,PPR|PF01535.16|0.043,PPR|PF01535.16|61,PPR|PF01535.16|0.043,PPR|PF01535.16|0.00082,PPR|PF01535.16|0.037,PPR|PF01535.16|0.0003,PPR|PF01535.16|2e-07,PPR|PF01535.16|5e-05,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.0009,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|1.1e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|4.8e+03,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|0.0086,ATP13|PF12921.3|3.3,ATP13|PF12921.3|2.8e+02,ATP13|PF12921.3|9.6e+02,ATP13|PF12921.3|1e+03,ATP13|PF12921.3|43,ECSIT|PF06239.7|1.6e+03,ECSIT|PF06239.7|5,ECSIT|PF06239.7|4.2e+02,ECSIT|PF06239.7|9.7e+02,ECSIT|PF06239.7|1.2,ECSIT|PF06239.7|3.9 S_Transcript_62214:184-2292(+)
MKGKFSLINGFTVGFNVVLKRNNLSRYFYSVNSALPALHSSEDETPFLDDVNSSYCVSVEQISRPCVGNRYVTNESRFLSSSPMKNSGRYIDGMGMIMSILVKQGWRLNDLGCSCCGVELHEEHVVAALNGVFVETGSAELTLHFFRWSEGSLGLKHTVRSICTLINVLVLGNMNYRVVDFLKFLVHGHPHCVQSEELVKLLREVCTRKVLETVYSMLVDCYTKENMVDEALQAIGFIEEFGIFPTAGVCNKVLKSLLDSNRAELGWDLVEKMLERGLVSTAIISLFISYYCRRGDLDCGWKLLIDMKKYGLKPDVVAYTTFIHFLCKESYLKEATSLVFKMVEMGISPDSVLLTSVIYGYCKMGRPEDGVSIIRLFNIYPNVFVYTSFISKLCKDSNMQKASTIFHEMTASGILPDSFVYTTMIDGYCKVRKISKALQYLGRMLKDGMEPSVATCTTLINSNCRIGDMEVAQRLLEKMIGKGLLPDIVAYNTIINGYKNKGDLQKAYELLDMMKSFGVSPDIVTYNTIIHGLVMKGYVAEANDMLNELIRRGFSPDVITFSTVIGGYSNKGQFAEAFLMWCQMSDCNVRPDVITCSALISGFCRAHRIDEARALFQKMQGFGLNPDLILYNTLIHGFCRSGNMEEAYQLITLMIEDGIVPDEVTYRALILGFEKNFARNPMESAFHKMQELVQRYDLYVAD*

Click here to download the sequence:
Link to NCBI Protein BLAST