Transcript Information: S_Transcript_62245.p1


Annotated TAIR IDAT3G63540.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23459372-23459803 | Reverse length=143
E-Value1.4E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1267.32002460216
Replicate 2265.02253309942
Replicate 3298.83230093184
Condition 2: 8 Hour
Replicate 1203.02465090539
Replicate 2205.8937614648
Replicate 3197.90811353568
Condition 3: 24 Hour
Replicate 1324.2100391226
Replicate 2280.53376524381
Replicate 3303.68981921932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62245.p1 GENE.S_Transcript_62245~~S_Transcript_62245.p1 ORF type:complete len:246 (+),score=52.07,PsbP|PF01789.12|2.6e-11 S_Transcript_62245:190-927(+)
ATGGCCACCATATTCTCACCTTCTGCACTTCTATCCACCTCCACTTCCACCTCAACAACCCCTCCTAAACCAACCCAAACTCAACCATATTTAAGCAAACCTCAGTTAACCATTCCACCCTCCAAGCCACCCCTAACTAACTTAACTACCAGTTTAACTGCTGTCGCCACCGCTGCCATCATCTTATCAACAACCCCTGCTTCCTTTGCAGAGAGTACATACAGCATTTACTATGGCACTGCTGCGAGTGCCGCAAATTATGGAGGCTACGGTGGCAATTCGAGCAAGAAAGATTCAGCTGAGTACATATATGATGTCCCTGAGGGTTGGAAAGAGAGGCTAGTATCAAAAGTTGAGAAGGGTACGAATGGGACTGATAGCGAGTTCTACAACCCAAAGAAGAAGTCTGAGAAAGAATACCTCACCTTCCTTGCTGGTTTTAGGCAACTAGCTCCAAAAGATGTCATTCTCAACAACTTGGCGCTGTCAGATGTGAACCTGCAAGATCAAATTGCGAATGCAGAGAACTTGACATCAGAAGAGAGGCAAGACGAGAAGGGGCAGCTTTACTATGATTATGAGATTGATGGGGCTGGTTCACACAGTTTGATTTCAGTTACATGTGCTAAGAACAAGCTCTATGCACATTTTGTTAGTGCACCTACTCCTGAATGGAACCGAGATCAGGATATGCTGCGGCACATCCACCAGTCATTTAAGACAGTCAATTCATCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62245.p1 GENE.S_Transcript_62245~~S_Transcript_62245.p1 ORF type:complete len:246 (+),score=52.07,PsbP|PF01789.12|2.6e-11 S_Transcript_62245:190-927(+)
MATIFSPSALLSTSTSTSTTPPKPTQTQPYLSKPQLTIPPSKPPLTNLTTSLTAVATAAIILSTTPASFAESTYSIYYGTAASAANYGGYGGNSSKKDSAEYIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKSEKEYLTFLAGFRQLAPKDVILNNLALSDVNLQDQIANAENLTSEERQDEKGQLYYDYEIDGAGSHSLISVTCAKNKLYAHFVSAPTPEWNRDQDMLRHIHQSFKTVNSS*

Click here to download the sequence:
Link to NCBI Protein BLAST