Transcript Information: S_Transcript_62396.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value1.1E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.006842755358
Replicate 214.362203728576
Replicate 312.210010869752
Condition 2: 8 Hour
Replicate 112.10998619117
Replicate 213.200010416238
Replicate 312.635987222897
Condition 3: 24 Hour
Replicate 115.067523515673
Replicate 213.686179843888
Replicate 311.947284191897


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62396.p1 GENE.S_Transcript_62396~~S_Transcript_62396.p1 ORF type:5prime_partial len:361 (+),score=54.55 S_Transcript_62396:1-1083(+)
TTCAACCAAGACCACTCCTGCTTCTCCGCCGCCACGTCATCCGGCTTCATAATCTTCAACTCCCTCCCTTTCCGAGAGATCTTCCGCCGCTCTTTCCCGACCCCCACCACTTCCGCGGACGCCGGTGCTGGTGGACCCGGCGGCGATGGCGGTGGTGGGATAGGACTCGTCCAGATGCTGTTCCGGTGTAACATACTGGCACTGGTTGGGGGCGGGCCCCACCCGCAGTACCCGCCCAACAAGGTCATGATCTGGGACGACCACCAGTGCCGCTGCATCGGAGAGCTCTCCTTCCGGTCCCCGGTTAAGTCTGTCCGGTTGCGTCGTGATCGCATCATCGTTGTTCTTCTTCAGAAGCTGTTTGTTTATAATTTTGCTGACTTGAAGCTCCTTCACCAGATTGAGACCATTGCTAACCCTAAGGGTTTGTGTGAGGTTTCTTGTTTGTCCAGTTCTCTTGTTTTGGTTTGTCCTGGATTGCAGAAGGGTCAGATTAGGGTTGAGCATTACGGGTCTAAACGGACTAAGTTTATATTGGCTCATGATTCGAGGATTGCTTGCTTGGCTTTGACTCTTGATGGGAGTAAGGTTGCTACTGCTAGTAGTAAGGGCACTCTTGTTAGGGTTTTCAACACATTGGATGGCACCTTGCTAAGAGAGGTTAGAAGGGGAACTGACAGAGCAGAGATACAAAGCCTAGCTTTTTCTTTCAATGCCCGATGGTTAGCAGCATCAAGTGACAGGGGAACCATTCATGTTTTCTGCCTGAAGCTTGATCCAGACTCTGAAGCAAAGAGTGGGTCTTCTAGTCCAACTGAACAGCCAAGTTCTCCACGTTCACCCATGTCATCTATCCCTTTTATGAAAGGTGTGTTGCCCAAGTATTTTAACTCAGAGTGGTCTATGGCCCAGTTTCGGTTGCAAGAAGGTATCCAGTATATTGTTGCCTTTGGCCCTCAAGAGAACACAGTCATAGTAGTTGGCATGGATGGAAGCTTCTATCGCTGTAGATTTGATCCTATATCTGGAGGAGAGATGGAACAACTAGAGTATTACAATTTCCTGAAGCCAGAAACCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62396.p1 GENE.S_Transcript_62396~~S_Transcript_62396.p1 ORF type:5prime_partial len:361 (+),score=54.55 S_Transcript_62396:1-1083(+)
FNQDHSCFSAATSSGFIIFNSLPFREIFRRSFPTPTTSADAGAGGPGGDGGGGIGLVQMLFRCNILALVGGGPHPQYPPNKVMIWDDHQCRCIGELSFRSPVKSVRLRRDRIIVVLLQKLFVYNFADLKLLHQIETIANPKGLCEVSCLSSSLVLVCPGLQKGQIRVEHYGSKRTKFILAHDSRIACLALTLDGSKVATASSKGTLVRVFNTLDGTLLREVRRGTDRAEIQSLAFSFNARWLAASSDRGTIHVFCLKLDPDSEAKSGSSSPTEQPSSPRSPMSSIPFMKGVLPKYFNSEWSMAQFRLQEGIQYIVAFGPQENTVIVVGMDGSFYRCRFDPISGGEMEQLEYYNFLKPETI*

Click here to download the sequence:
Link to NCBI Protein BLAST