Transcript Information: S_Transcript_62398.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value1.3E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0414858554492
Replicate 22.2588094070789
Replicate 31.756451055581
Condition 2: 8 Hour
Replicate 11.9802148151623
Replicate 21.8110544136922
Replicate 31.8778246699626
Condition 3: 24 Hour
Replicate 12.0804650943423
Replicate 23.2376873680496
Replicate 31.5013121669712


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62398.p1 GENE.S_Transcript_62398~~S_Transcript_62398.p1 ORF type:5prime_partial len:420 (+),score=64.24 S_Transcript_62398:1-1260(+)
TTCAACCAAGACCACTCCTGCTTCTCCGCCGCCACGTCATCCGGCTTCATAATCTTCAACTCCCTCCCTTTCCGAGAGATCTTCCGCCGCTCTTTCCCGACCCCCACCACTTCCGCGGACGCCGGTGCTGGTGGACCCGGCGGCGATGGCGGTGGTGGGATAGGACTCGTCCAGATGCTGTTCCGGTGTAACATACTGGCACTGGTTGGGGGCGGGCCCCACCCGCAGTACCCGCCCAACAAGGTCATGATCTGGGACGACCACCAGTGCCGCTGCATCGGAGAGCTCTCCTTCCGGTCCCCGGTTAAGTCTGTCCGGTTGCGTCGTGATCGCATCATCGTTGTTCTTCTTCAGAAGCTGTTTGTTTATAATTTTGCTGACTTGAAGCTCCTTCACCAGATTGAGACCATTGCTAACCCTAAGGGTTTGTGTGAGGTTTCTTGTTTGTCCAGTTCTCTTGTTTTGGTTTGTCCTGGATTGCAGAAGGGTCAGATTAGGGTTGAGCATTACGGGTCTAAACGGACTAAGTTTATATTGGCTCATGATTCGAGGATTGCTTGCTTGGCTTTGACTCTTGATGGGAGTAAGGTTGCTACTGCTAGTAGTAAGGGCACTCTTGTTAGGGTTTTCAACACATTGGATGGCACCTTGCTAAGAGAGGTCAGGTGCTTTGGGAAAAAAAAAAAGAAAAGGAGAACTTCAAGCAGAGAGCAGCCACAACGTTCATCCTCTCCCCCAAAATTGAAAACCCTAACCCTAACCACTCAAGCAATCACATCTCCTCTCATCCTCTCACCAGAGACTCGCCGGATTCTCGCCGAAGAATCGCCGACAGAGGTTAGAAGGGGAACTGACAGAGCAGAGATACAAAGCCTAGCTTTTTCTTTCAATGCCCGATGGTTAGCAGCATCAAGTGACAGGGGAACCATTCATGTTTTCTGCCTGAAGCTTGATCCAGACTCTGAAGCAAAGAGTGGGTCTTCTAGTCCAACTGAACAGCCAAGTTCTCCACGTTCACCCATGTCATCTATCCCTTTTATGAAAGGTGTGTTGCCCAAGTATTTTAACTCAGAGTGGTCTATGGCCCAGTTTCGGTTGCAAGAAGGTATCCAGTATATTGTTGCCTTTGGCCCTCAAGAGAACACAGTCATAGTAGTTGGCATGGATGGAAGCTTCTATCGCTGTAGATTTGATCCTATATCTGGAGGAGAGATGGAACAACTAGAGTATTACAATTTCCTGAAGCCAGAAACCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62398.p1 GENE.S_Transcript_62398~~S_Transcript_62398.p1 ORF type:5prime_partial len:420 (+),score=64.24 S_Transcript_62398:1-1260(+)
FNQDHSCFSAATSSGFIIFNSLPFREIFRRSFPTPTTSADAGAGGPGGDGGGGIGLVQMLFRCNILALVGGGPHPQYPPNKVMIWDDHQCRCIGELSFRSPVKSVRLRRDRIIVVLLQKLFVYNFADLKLLHQIETIANPKGLCEVSCLSSSLVLVCPGLQKGQIRVEHYGSKRTKFILAHDSRIACLALTLDGSKVATASSKGTLVRVFNTLDGTLLREVRCFGKKKKKRRTSSREQPQRSSSPPKLKTLTLTTQAITSPLILSPETRRILAEESPTEVRRGTDRAEIQSLAFSFNARWLAASSDRGTIHVFCLKLDPDSEAKSGSSSPTEQPSSPRSPMSSIPFMKGVLPKYFNSEWSMAQFRLQEGIQYIVAFGPQENTVIVVGMDGSFYRCRFDPISGGEMEQLEYYNFLKPETI*

Click here to download the sequence:
Link to NCBI Protein BLAST