Transcript Information: S_Transcript_62450.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value9.4E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.404364982499
Replicate 28.5072620751434
Replicate 39.3776624153901
Condition 2: 8 Hour
Replicate 18.9458205143905
Replicate 26.9201057233053
Replicate 38.1289249341031
Condition 3: 24 Hour
Replicate 111.107567876573
Replicate 29.6033099899777
Replicate 310.152941603754


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62450.p1 GENE.S_Transcript_62450~~S_Transcript_62450.p1 ORF type:3prime_partial len:236 (+),score=59.12,RNase_PH|PF01138.17|5.5e-25 S_Transcript_62450:351-1055(+)
ATGGAGGTTGATAGAGAAGATGGGCGTACCCCAAATCAATTGAGACCATTATCTTGTTCTAGAAACGTTCTCAACCGTGCTCATGGCTCTGCTAGTTGGTCCCAAGGGGATACGAAAGTCTTAGCAGCAGTTTATGGGCCAAAAGCTGGGACAAAGAAGAATGAAAATCCTGAGAAGGCTTCTATTGAAGTCATTTGGAAACCCAAGACTGGACAAATTGGGAAGCTGGAAAAGGAGTATGAGATAATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATTGTGCAGGTTGTCAACGACGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGAAAATGAAGGCATTCGTATATTTGGTGTTTCCAAATTCAGTTCTATCAGTCCTGTGTCAAGGTTCTTCATGTATAGATGGTGAACCTATGGAGAATGGGATCATAACATCTGTTACTCATGGGGCAATGTCAGTGGAAGATTATTTTCACTGTTTAGAAAGAGGGCGAGCTGCAACATCAAAGCTGTCTGATTTTCTGAGAAGAAGCTTACAAACTCGGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62450.p1 GENE.S_Transcript_62450~~S_Transcript_62450.p1 ORF type:3prime_partial len:236 (+),score=59.12,RNase_PH|PF01138.17|5.5e-25 S_Transcript_62450:351-1055(+)
MEVDREDGRTPNQLRPLSCSRNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLEKEYEIILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAVAICCCLTETGYVILDPTKQEEQKMKAFVYLVFPNSVLSVLCQGSSCIDGEPMENGIITSVTHGAMSVEDYFHCLERGRAATSKLSDFLRRSLQTRL

Click here to download the sequence:
Link to NCBI Protein BLAST