Transcript Information: S_Transcript_62456.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value1.5E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9924172047729
Replicate 22.8315879646008
Replicate 33.3532247424728
Condition 2: 8 Hour
Replicate 11.8246323265996
Replicate 24.1872443978098
Replicate 33.3056662061201
Condition 3: 24 Hour
Replicate 11.7522633815985
Replicate 21.9391496535912
Replicate 32.8324220989703


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62456.p1 GENE.S_Transcript_62456~~S_Transcript_62456.p1 ORF type:3prime_partial len:187 (+),score=43.58,RNase_PH|PF01138.17|2.8e-25 S_Transcript_62456:351-908(+)
ATGGAGGTTGATAGAGAAGATGGGCGTACCCCAAATCAATTGAGACCATTATCTTGTTCTAGAAACGTTCTCAACCGTGCTCATGGCTCTGCTAGTTGGTCCCAAGGGGATACGAAAGTCTTAGCAGCAGTTTATGGGCCAAAAGCTGGGACAAAGAAGAATGAAAATCCTGAGAAGGCTTCTATTGAAGTCATTTGGAAACCCAAGACTGGACAAATTGGGAAGCTGGAAAAGGAGTATGAGATAATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATTGTGCAGGTTGTCAACGACGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGGTGATTCAATCTTCCCTTTCTTTATATTTCCAATCTTCCCTTTCTTTATATTTCCAATCTTCCCTTTCTTTATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62456.p1 GENE.S_Transcript_62456~~S_Transcript_62456.p1 ORF type:3prime_partial len:187 (+),score=43.58,RNase_PH|PF01138.17|2.8e-25 S_Transcript_62456:351-908(+)
MEVDREDGRTPNQLRPLSCSRNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLEKEYEIILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAVAICCCLTETGYVILDPTKQEEQVIQSSLSLYFQSSLSLYFQSSLSLY

Click here to download the sequence:
Link to NCBI Protein BLAST