Transcript Information: S_Transcript_62515.p1


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value3.7E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0199150337793
Replicate 21.5647368480507
Replicate 34.0547859474583
Condition 2: 8 Hour
Replicate 11.6636829325423
Replicate 24.601302202497
Replicate 31.9652909139345
Condition 3: 24 Hour
Replicate 12.3239237755951
Replicate 22.7325162893468
Replicate 32.8620759608642


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62515.p1 GENE.S_Transcript_62515~~S_Transcript_62515.p1 ORF type:complete len:141 (+),score=11.11,PseudoU_synth_1|PF01416.16|8.7e-13 S_Transcript_62515:586-1008(+)
ATGTATCGGTACAGCATATATAATGGCCCCGTCATGGACCCCTTTCAGCGTCGATATGCGTATCATAGTGTTTATAAGCTTAATGCATCTGTCATGGTAGAGGGTGCAAATCATTTTATTGGAACGCATGACTTTTCTGCCTTTGCTAATGCGATTCGTAATGATGGAGTACGAGATCCTGTGAAGACTATATCCCGATTTGATATCAATGAAAAGGGACCTCTTGTAGAGCTGGAAGTAGAAGGCTCTGGTTTCTTCTATAGACAAGTCCGAAATATGGTTGCATTATTACTTCAAATCGGAAGAGAAGCAGTTCCTCCTGATATGGAACCGATGATTATGGAAACAAGAGATCGCAAAGAATTGGCCAAGTATGCGTTGTCAGCCCCTGCTCACGGACTGTCTGGTAGAGGTAAAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62515.p1 GENE.S_Transcript_62515~~S_Transcript_62515.p1 ORF type:complete len:141 (+),score=11.11,PseudoU_synth_1|PF01416.16|8.7e-13 S_Transcript_62515:586-1008(+)
MYRYSIYNGPVMDPFQRRYAYHSVYKLNASVMVEGANHFIGTHDFSAFANAIRNDGVRDPVKTISRFDINEKGPLVELEVEGSGFFYRQVRNMVALLLQIGREAVPPDMEPMIMETRDRKELAKYALSAPAHGLSGRGKV*

Click here to download the sequence:
Link to NCBI Protein BLAST