Transcript Information: S_Transcript_62515.p2


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.115078274385
Replicate 233.942753165407
Replicate 331.053153918541
Condition 2: 8 Hour
Replicate 128.980658636104
Replicate 232.314892479605
Replicate 326.781449554977
Condition 3: 24 Hour
Replicate 131.18030378572
Replicate 229.830999852628
Replicate 326.946628637945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62515.p2 GENE.S_Transcript_62515~~S_Transcript_62515.p2 ORF type:5prime_partial len:117 (+),score=7.16,PseudoU_synth_1|PF01416.16|7.5e-10 S_Transcript_62515:2-352(+)
GCGGGATTCCCAGCCTTATCTCAGGGGATGAGTTGCGCAATCCGGGCCCCGTTGCCTCTCCTCCTCAATTCTTGCCTTTCTACTCCCAATCCTACTCTATCTATAAACAATAATACATGTGGAGGGAACTCACAAGTATCCACTGAATTTCTCAAGCCCACAATTCCTCTCTTCAAATGGCGCTTAGTTATTTCCTATGATGGTACCCATTATGCTGGGTGGCAGTATCAAGTATCACCCCCAACAGTACAGTGTGCTATAGAGAAGGCTTTGATAGAGATCACGAAGTTGGATCGGAAAGACCTAAATTTAGTTGGTGCAGGCAGGACAGATACAGGAGTCCATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62515.p2 GENE.S_Transcript_62515~~S_Transcript_62515.p2 ORF type:5prime_partial len:117 (+),score=7.16,PseudoU_synth_1|PF01416.16|7.5e-10 S_Transcript_62515:2-352(+)
AGFPALSQGMSCAIRAPLPLLLNSCLSTPNPTLSINNNTCGGNSQVSTEFLKPTIPLFKWRLVISYDGTHYAGWQYQVSPPTVQCAIEKALIEITKLDRKDLNLVGAGRTDTGVHA*

Click here to download the sequence:
Link to NCBI Protein BLAST