Transcript Information: S_Transcript_62546.p1


Annotated TAIR IDAT2G41945.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17509933-17512898 | Reverse length=204
E-Value2.7E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.683557629439
Replicate 242.082728230075
Replicate 343.374583011431
Condition 2: 8 Hour
Replicate 151.602179038989
Replicate 245.848479928329
Replicate 343.815908965795
Condition 3: 24 Hour
Replicate 147.869960735561
Replicate 235.254818007652
Replicate 337.988758239804


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62546.p1 GENE.S_Transcript_62546~~S_Transcript_62546.p1 ORF type:complete len:162 (+),score=24.60 S_Transcript_62546:82-567(+)
ATGGGGACAAGAGAAGTTTACGAAGAGAAATTAAGAACAGGGAATGTATATCACCATGATCCCACCATCAAGCCCGGCTTAGGCTCTCCTCGTTGCCCTCGTTGTCTCTCTCTCCTCCACCCCTCCTCCTCTTTCGAAAACGGTGAATGGACTATCACTTCTGTCTTACACGATGCCACCGCCGTTGCTGGTACTGGAATTGGAGCGATGTTAAGTGCCATCCATGGTTTTAATACTGGGATACCTTTTGCCCAGAAACATGTTAAAGGACCCAAGTGGCTTCCGTTTGTTGTTGGGCTTCCACCCTTGCTTATGTATTCAGCTGGATGTGCCGCATTTGGTGGCTATGCTCTTCCAAGATTCACTCAGCTTACTGTGACATCATATTATGCTGCTTCAAGTGCCTCACATTATGGGATTTCTCTACTCACAAGACACATTGAAGAGGCACATATGTCGTCAACCTCACAGCAGGAGAAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62546.p1 GENE.S_Transcript_62546~~S_Transcript_62546.p1 ORF type:complete len:162 (+),score=24.60 S_Transcript_62546:82-567(+)
MGTREVYEEKLRTGNVYHHDPTIKPGLGSPRCPRCLSLLHPSSSFENGEWTITSVLHDATAVAGTGIGAMLSAIHGFNTGIPFAQKHVKGPKWLPFVVGLPPLLMYSAGCAAFGGYALPRFTQLTVTSYYAASSASHYGISLLTRHIEEAHMSSTSQQEKL*

Click here to download the sequence:
Link to NCBI Protein BLAST