Transcript Information: S_Transcript_62548.p2


Annotated TAIR IDAT2G41945.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17509933-17512898 | Reverse length=204
E-Value2.4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8145228114896
Replicate 20.25071351769903
Replicate 31.886188917641
Condition 2: 8 Hour
Replicate 11.4540038852591
Replicate 21.7795788690692
Replicate 30.96890216386279
Condition 3: 24 Hour
Replicate 11.2411865619656
Replicate 22.8329764470434
Replicate 34.8724403964429


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62548.p2 GENE.S_Transcript_62548~~S_Transcript_62548.p2 ORF type:complete len:88 (+),score=7.25 S_Transcript_62548:138-401(+)
ATGGGGACAAGAGAAGTTTACGAAGAGAAATTAAGAACAGGGAATGTATATCACCATGATCCCACCATCAAGCCCGGCTTAGGCTCTCCTCGTTGCCCTCGTTGTCTCTCTCTCCTCCACCCCTCCTCCTCTTTCGAAAACGGTGAATGGACTATCACTTCTGTCTTACACGATGCCACCGCCGTTTGTCGTAATAGGGCTCCTGTCCAGGCTGGGTGGGGAGTTGGATGTACGCAGTCCTTCTCCGAGATTGCTTCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62548.p2 GENE.S_Transcript_62548~~S_Transcript_62548.p2 ORF type:complete len:88 (+),score=7.25 S_Transcript_62548:138-401(+)
MGTREVYEEKLRTGNVYHHDPTIKPGLGSPRCPRCLSLLHPSSSFENGEWTITSVLHDATAVCRNRAPVQAGWGVGCTQSFSEIASV*

Click here to download the sequence:
Link to NCBI Protein BLAST