Transcript Information: S_Transcript_62550.p1


Annotated TAIR IDAT2G41945.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17509933-17512898 | Reverse length=204
E-Value3.2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0258323260876
Replicate 25.4715718102637
Replicate 35.1639661034082
Condition 2: 8 Hour
Replicate 16.4829186564084
Replicate 26.2641176191234
Replicate 37.6737051377933
Condition 3: 24 Hour
Replicate 16.4660855132159
Replicate 26.527177733988
Replicate 36.2550670124688


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62550.p1 GENE.S_Transcript_62550~~S_Transcript_62550.p1 ORF type:complete len:125 (+),score=18.80 S_Transcript_62550:82-456(+)
ATGGGGACAAGAGAAGTTTACGAAGAGAAATTAAGAACAGGGAATGTATATCACCATGATCCCACCATCAAGCCCGGCTTAGGCTCTCCTCGTTGCCCTCGTTGTCTCTCTCTCCTCCACCCCTCCTCCTCTTTCGAAAACGGTGAATGGACTATCACTTCTGTCTTACACGATGCCACCGCCGTTCTTCCACCCTTGCTTATGTATTCAGCTGGATGTGCCGCATTTGGTGGCTATGCTCTTCCAAGATTCACTCAGCTTACTGTGACATCATATTATGCTGCTTCAAGTGCCTCACATTATGGGATTTCTCTACTCACAAGACACATTGAAGAGGCACATATGTCGTCAACCTCACAGCAGGAGAAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62550.p1 GENE.S_Transcript_62550~~S_Transcript_62550.p1 ORF type:complete len:125 (+),score=18.80 S_Transcript_62550:82-456(+)
MGTREVYEEKLRTGNVYHHDPTIKPGLGSPRCPRCLSLLHPSSSFENGEWTITSVLHDATAVLPPLLMYSAGCAAFGGYALPRFTQLTVTSYYAASSASHYGISLLTRHIEEAHMSSTSQQEKL*

Click here to download the sequence:
Link to NCBI Protein BLAST