Transcript Information: S_Transcript_62553.p2


Annotated TAIR IDAT1G79430.2
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)APL, WDY
Annotation TypeOrtholog
Chromosome Positionchr1:29877521-29879135 | Reverse length=358
E-Value2.4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3265398924562
Replicate 20
Replicate 30.90516496115831
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.26154414239241
Condition 3: 24 Hour
Replicate 10.40205307037903
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62553.p2 GENE.S_Transcript_62553~~S_Transcript_62553.p2 ORF type:5prime_partial len:163 (+),score=27.85,Myb_DNA-binding|PF00249.27|4.4e-08 S_Transcript_62553:3-491(+)
GGAAGTAAGATAAAGAAAGGAGCAAAGCTAGTCCTTCAAAAACGCATCCTATTCTCCCTTATTTGCATTGCATTTGTGCTTGAATCTTTCTGGTATTCTTCAGTGCTAACTCAGAGAGAGAGAAAGGAGAGAGAGAAAAGAATGTTCCATCCCAAGATGAAACCTTCTTCTATGAATTCAAGTGAAAGGTCTTCTATGTGTGTCCAGAATGACTCTGGCCTTGTTCTCACCACCGACCCCAAGCCTCGTCTCCGTTGGACTGTTGAGCTCCATGAACGTTTCGTCGATGCTGTCACTCAGCTCGGCGGCCCTGATAAAGCAACGCCCAAGACAATCATGAGAGTGATGGGTGTCAAAGGACTTACCTTATATCATTTGAAGAGTCATCTCCAGAAATTCAGGCTAGGCAAACAGCCACATAAGGAATTCAATGACCATGCAGTTAAGGATGGTAAGAGAGGTGACTTGGTATCATATACCCGTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62553.p2 GENE.S_Transcript_62553~~S_Transcript_62553.p2 ORF type:5prime_partial len:163 (+),score=27.85,Myb_DNA-binding|PF00249.27|4.4e-08 S_Transcript_62553:3-491(+)
GSKIKKGAKLVLQKRILFSLICIAFVLESFWYSSVLTQRERKEREKRMFHPKMKPSSMNSSERSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHAVKDGKRGDLVSYTRL*

Click here to download the sequence:
Link to NCBI Protein BLAST