Transcript Information: S_Transcript_62588.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value1.8E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0645200494072
Replicate 20.35300463292024
Replicate 31.475418886688
Condition 2: 8 Hour
Replicate 10.85301561268532
Replicate 21.7897478911781
Replicate 30.3410535616797
Condition 3: 24 Hour
Replicate 10.87379533962377
Replicate 20.9065524630539
Replicate 30.60532906572279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62588.p1 GENE.S_Transcript_62588~~S_Transcript_62588.p1 ORF type:5prime_partial len:125 (+),score=19.25 S_Transcript_62588:2-376(+)
AAAGATTGGATGAAGGATTCCGCTAGAAAAAAAGTGGCATCCTATCTTTTACAAGATTCTTTTTGGAGAAATATTGTTTATGCTCTCAAATTGACGGGTCATCTTGTTAAAGTTCTTAGAATGGTTGGTGGAGATAAGAAGCCGGCCATGGGTTATATTTATGAGGCAATGGATAGGGCTAAGGAGGCAATTGCAAATAGCTTTAGGCAAAAAGAAGATCAATACAAGGGAGCATTTGAGATTATTGATGCTAGGTGGGATTGTCAACTCCATAAGCCTTTACATGCCGCCGGGTACTTCTTGAACCCCGAGATGTATTATGGTAATGAGACCAATGCAACTTGTGTATTTATATGTTATGTGTTGGAAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62588.p1 GENE.S_Transcript_62588~~S_Transcript_62588.p1 ORF type:5prime_partial len:125 (+),score=19.25 S_Transcript_62588:2-376(+)
KDWMKDSARKKVASYLLQDSFWRNIVYALKLTGHLVKVLRMVGGDKKPAMGYIYEAMDRAKEAIANSFRQKEDQYKGAFEIIDARWDCQLHKPLHAAGYFLNPEMYYGNETNATCVFICYVLEM*

Click here to download the sequence:
Link to NCBI Protein BLAST