Transcript Information: S_Transcript_62592.p1


Annotated TAIR IDAT1G12840.1
Annotated Gene Namevacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
Annotated Gene Symbol(s)DET3, ATVHA-C
Annotation TypeOrtholog
Chromosome Positionchr1:4375584-4378220 | Forward length=375
E-Value3.6E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1140.99228313957
Replicate 2150.09738214926
Replicate 3137.83002232691
Condition 2: 8 Hour
Replicate 1173.09864693588
Replicate 2175.40481327105
Replicate 3174.32508347159
Condition 3: 24 Hour
Replicate 1148.38253307175
Replicate 2143.15572471762
Replicate 3158.04025696397


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62592.p1 GENE.S_Transcript_62592~~S_Transcript_62592.p1 ORF type:complete len:376 (+),score=68.28,V-ATPase_C|PF03223.11|6.6e-124 S_Transcript_62592:222-1349(+)
ATGGCGACGAGATACTGGATGGCGTCTCTTCCTGTCCAAACCTCCGCTTCTACTCTATGGAATCAATTACAAGAATCCATGTCCAAACAAGCCTTCGACACCCCTATCTACAGATTCTATACGCCTAATCTTCGTGTGGGCACCCTAGATTCGCTTCTATCACTTGCTGATGACCTCCTTAAGTCGAATGCATTTGTGGAAGGAGTCACGCACAAGATCAGGCGTCAGATCGATGAACTGGAGAGATCATCTGGTGTTTATTCTGGTGCTTTGACTGTTGATGGAGTTCCTATTGATTCTTACCTTACAAGATTTGTTTGGGATGAAGCAAAATATCCAGTTATGTCGCCATTGAAGGAGATTATCGATAACATTCATAGCTTTGTGGCAAAGGTTGAAGACGACCTTAAGGTTCGCGTGGCTGAGTATAACAATGTCCGCAGTCAACTTAGTGCAATAAATCGCAAACAAAGTGGAAGCTTAGCTGTCAGAGATCTTTCCAACTTGGTGAAGCCAGAGGATATTATTGCGACAGAGCATTTGGTAACACTTCTGGCTGTTGTTTCCAAGTATTCTCAAAAGGACTGGTTATCAAGCTATGAATCATTGACTGAATATGTGGTCCCCAGGTCATCTAAGAAGTTGTACGAGGACAATGAATATGCTCTTTACACCGTAACTATGTTTACTCGTGTTGCTGATAACTTCAGAATAAAAGCACGTGAAAGAGGATTTCAGGTTCGAGATTTTGAATACAATCCAGAAACACAAGAGACACGGAAGCAAGAGTTGGAAAAATTGATGCATGACCAGGAATCACTGAGAAGTTCTCTTGTGCAGTGGTGCTATTCTAGTTATGGGGAGGTTTTCAGCTCATGGATGCACTTCTGTGCTGTACGGGTCTTCACTGAGAGCATTTTGAGATATGGCTTGCCACCATCCTTCCTGGCATGTGTCTTGGCTCCATCGCAAAAAAGTGAGAAGAAAGTACGCTCAATTCTTGAACGACACTGCCATACATCAAACAGTGTCCACTGGAAATTGGATGACGAAGTTGGAGGAATGGCTGGTCTGGCGGGTGAAACAGATGCATACCCATATGTATCCTTCACAATCAACCTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62592.p1 GENE.S_Transcript_62592~~S_Transcript_62592.p1 ORF type:complete len:376 (+),score=68.28,V-ATPase_C|PF03223.11|6.6e-124 S_Transcript_62592:222-1349(+)
MATRYWMASLPVQTSASTLWNQLQESMSKQAFDTPIYRFYTPNLRVGTLDSLLSLADDLLKSNAFVEGVTHKIRRQIDELERSSGVYSGALTVDGVPIDSYLTRFVWDEAKYPVMSPLKEIIDNIHSFVAKVEDDLKVRVAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDIIATEHLVTLLAVVSKYSQKDWLSSYESLTEYVVPRSSKKLYEDNEYALYTVTMFTRVADNFRIKARERGFQVRDFEYNPETQETRKQELEKLMHDQESLRSSLVQWCYSSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSQKSEKKVRSILERHCHTSNSVHWKLDDEVGGMAGLAGETDAYPYVSFTINLV*

Click here to download the sequence:
Link to NCBI Protein BLAST