Transcript Information: S_Transcript_62684.p1


Annotated TAIR IDAT1G67230.1
Annotated Gene Namelittle nuclei1
Annotated Gene Symbol(s)LINC1
Annotation TypeOrtholog
Chromosome Positionchr1:25151561-25156032 | Reverse length=1132
E-Value4.6e-312
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.938947676713
Replicate 243.282903124986
Replicate 341.784323939407
Condition 2: 8 Hour
Replicate 141.928827316238
Replicate 242.005476221987
Replicate 338.44994038468
Condition 3: 24 Hour
Replicate 140.276503935783
Replicate 238.323875825282
Replicate 336.935407041173


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62684.p1 GENE.S_Transcript_62684~~S_Transcript_62684.p1 ORF type:complete len:1152 (+),score=400.59 S_Transcript_62684:330-3785(+)
ATGTTTACTCCTCAGAGGAAGGCGTTTTCAGGCTGGTCACTCACGCCAAGACGTGATAATCCCAAAACTCCGAACCCTAATTCGAATTCCAACTCCAGAATTGCGGAAAATGGAGGCACAATGGCCGGTGATGGTACCGATCTTGAAGATTTGGCTGACAAGGTCTCTAAGCTCGAAAACGAGCTATTTGAGTACCAATACAATATGGGGCTTTTGTTGATTGAGAAGAAGGAACTGGGTTCTAAGTATGATGATCTCCAGCAAGCACTGGCTGAGGCAAAGGAGGAACTGAAGCGTGAGCAGGTAGCTCATCTGATTGCAACATCCGATCTTGAGAAAAGAGAGGAGAATCTGAGGAAGGCCTTGGGTGTAGAGAAGCAGTGTGTTCTTGATCTGGAGAAGGCCCTGCGTGAGATAAGATCTGAAAATGCTGAAATTAAATTTGTAGCGGACTCTAAATTGGCTGAAGCCAATGCTTTGGCAGCAAGCATTGAGGAGAAATCATTAGAGGTTGAAGCAAAGCTACGTGCTGCCGATGCTAAATTTGCCGAGGCAAGTAGAAAGAATTCGGAGATAGACAGAAAATTGCAAGAGGTGGAAGGTCGGGCAAGTGTTCTGCGAAGGGAGCGTTTATCTTTTAATTCTGAGAAAGATGCCCATGATGCGAGTTTCTCTAAACAGAGGGAGGACTTGTTAGAGTGGGAAAGAAAATTACAAGAAGGAGAAGAAAGATTGTGTGAGGCCCGTAGAATCCTCAACCAGAGAGAAGAGAGAGTGAATGAGGTTGATAGGAATTTTAAGCAGAAGGAAAGTGAGCTGGAAGAGGCGCAAAAGAAGATGGATAGAGCCAAAATGGATCTAAGGAAGCAAGAAGAGGATATGAGCCAGAGACTAGCAAACCTGGTTGTCAAAGAGAAGGAAACTGTTTCTCTGAGAAAAAGAATTGAATCCAAAGAGAAAGAATTACTTGCATATGAAAAGCGGCTTAATGAGAGAGAAAATAATGAGATTCAGAAGCTTCTGGATGACCACAAAGCTCAGTTGGATGTTAAAAATAGGGAATTTGAGCTTGAGGTGGACCAAAAGAGGAGATCGCTTGATGAAGAATTAAAAAAAAAGGTCATGGAATTAGAAAAAAAGGGAGTTGAGATCAGTCACATGGAGGAGAAAATCACTAAAAGGGAACAGGCGTTGGACAAGAAATTGGAGAAGTGCAAGGATAAAGAAAATGACTTGGAATCAAAGTTGAAAGCATTGAAGGAAAAAGAGAAGAGCTTTAAGGCAGAGCAGAAAGAAGTGGAGATGGAAAAGAAAAAGATGCTGGTTGATATGGATAATTTACAGAAGCTCAGGGAAGAACTTGAGCAAATTAGAGCTGCCAATGAGGAGCAGCTTCGTGAGATACAACAAAAGAAGTTACAGCTTCAAGTGACGGAGGAAGAGAGATCAGAGTATTCACGTCTCCAAACAGAACTAAAACGAGAGATAGAAGAGTGCAGATCACAGAAGGAAGTGCTTTTGAAGGAAGCTGCGGAGCTGAAACAGGAAAGGATGTCATTTGAGCAGGAGTGGGAAGGCCTTGATGAGAAACGGGTGGAAATCGAGAGAGAGTTGAAGAAAATAGAGGAGGAAAAGGAGAAATGGGGAAAATGGAGACATTCAGAAGAGGAAAGGTTAAGGAGTGAGAGTCTGGCGACTCAAAAGAACATAGAAAATGAGTTGGAAGCTCTTAAATTGGCTAAAGATTCATTTGCGGCTAATATGGAGCATGAGAAGTCGGTGTTATTGGAGAAGGAGCAGACTGAAAGAAGGAAGTTGCTTGATGATTTTGAGCAACAGAAGAGAGATCTTGAGATTGAAATGCAGAAGAAGTTTGAAGAGAGGGAAAGAGACCTTTGTGAAAAAGAGAAATTGTTTGAAGAAGAGAAGGAGAAGGAACAAAAGAACTTAAGCTATTTAAGAGAGATAGCTGAAAGAGGAATGGCAGACTTGAAAGAGGAGCGAAAGAGGATTGGAAAGCAAACAGAAGAAGTGGCCACAAACAGGCAAGAGTTGGAGGAACGCAGACTTGAAATACAAAAGGATATTGATGAGCTTGTTGTCCTTAGTAGCAAATTGAAGGACCAGAGAGAGCAGCTAGTAAAGGAGAGGGAGCGGTTCGTCGCTTTTGTGGACAAAGTTAAAAGCTGTGACCAATGTGGGGAGATGATCCGTGAGTTCATGCTCTCTGATCTTCAGTATTTACATGATATTGAAAGTAGGGAGATCCTGCCATTACCAAAGCTGGCTGAAGATTATATGAGAAACGCCATGAAGAAGAGTTACCAACCACCTGAACTCAGGAATACTGACGCATCCCCTGTTGTAGGAGATACTCGTTCCTCTGGGAAAACTGTGTCTTGGCTGATGCAGAAGTGTGCAGAGAAGATACGTAAGCTCTCTCCTATTAAAAGAGGTGAGCTAGTAGACCAGGATGCTAATGCAGGACCGTCAGGACCAGTTGCTGTCAGATTTGATGTTGCTGAAGAAGTGTTAGAATTGTCTGATAGGGTAGTAAATGATTCGTTTGATGTCCAGAGGGTACAAATTGATGAAAGTGCCACAGAGTTTGAAGGTGGTCAAGAGCCCTCAGTTGGTGGGTGGGGCAACACCTCTCAGCATTCCGATGGACCTGATAAGACAGAGAGGCGGAGGCTTAGGACGCGCTCTGTAAAGCAGGTGATAAAAGATGCTAAGGACTTTCTTGGGAATTCAGCGGAGCTGAATGATGATGAGCATCCAAACGGTGATGCTGAAGATTCTACGCGTATGGATGATGAGAGTAGAGAGGTCTCTGGTCTTGCAGATAAAGAAAATAGAAGAAAGGGAAGGAAACGTGGTCGTGCTTACACGTCACAAGCTACCGCCAGTGAGCATGATGATGGGGAGAGTGAAGCACGTTCGGATAGTATTGTGGCTGATGGGCCCAGGACAAGGCGGCAAAAAGTTGCTGCTGCACAAGGGCCTGTTGAAAGACGATATAATCTCCGAAGACCAAGGAATGTGTCAAAAACTGCAGCGGTCAAAACTTCATCTGTTTCCAGGAAAGCAAAGGATGGTGAAGATGGGGGAAGTGAAGCTCAGGAAGAAAATTCCAGACCGAGACCCTTGCATTCAGGAGTTGCTAGTGATAATGGTGGAAGCGTGAACTTAATGCAGACTGCAACTGGGGAGGAACCCAAAATCTACAGTACTCCTGTACCTAACAGGATGATTAATAGTACAGTTTTGAATGAAGAGGTGAATGGTACTCCTGATAGGCATGGTGGATATGGGGATGAAGTGGAACCAAGAACTGGTTCTCAAGAGGACCTCAGCACCAGAGAGGATGTCAGTGAGGAAGGGGATGGTGAAGAGGCTGAGCACCCTGGTGAAGCTTCGATAGGGAAGAAGCTGTGGAAATTCTTGACAACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62684.p1 GENE.S_Transcript_62684~~S_Transcript_62684.p1 ORF type:complete len:1152 (+),score=400.59 S_Transcript_62684:330-3785(+)
MFTPQRKAFSGWSLTPRRDNPKTPNPNSNSNSRIAENGGTMAGDGTDLEDLADKVSKLENELFEYQYNMGLLLIEKKELGSKYDDLQQALAEAKEELKREQVAHLIATSDLEKREENLRKALGVEKQCVLDLEKALREIRSENAEIKFVADSKLAEANALAASIEEKSLEVEAKLRAADAKFAEASRKNSEIDRKLQEVEGRASVLRRERLSFNSEKDAHDASFSKQREDLLEWERKLQEGEERLCEARRILNQREERVNEVDRNFKQKESELEEAQKKMDRAKMDLRKQEEDMSQRLANLVVKEKETVSLRKRIESKEKELLAYEKRLNERENNEIQKLLDDHKAQLDVKNREFELEVDQKRRSLDEELKKKVMELEKKGVEISHMEEKITKREQALDKKLEKCKDKENDLESKLKALKEKEKSFKAEQKEVEMEKKKMLVDMDNLQKLREELEQIRAANEEQLREIQQKKLQLQVTEEERSEYSRLQTELKREIEECRSQKEVLLKEAAELKQERMSFEQEWEGLDEKRVEIERELKKIEEEKEKWGKWRHSEEERLRSESLATQKNIENELEALKLAKDSFAANMEHEKSVLLEKEQTERRKLLDDFEQQKRDLEIEMQKKFEERERDLCEKEKLFEEEKEKEQKNLSYLREIAERGMADLKEERKRIGKQTEEVATNRQELEERRLEIQKDIDELVVLSSKLKDQREQLVKERERFVAFVDKVKSCDQCGEMIREFMLSDLQYLHDIESREILPLPKLAEDYMRNAMKKSYQPPELRNTDASPVVGDTRSSGKTVSWLMQKCAEKIRKLSPIKRGELVDQDANAGPSGPVAVRFDVAEEVLELSDRVVNDSFDVQRVQIDESATEFEGGQEPSVGGWGNTSQHSDGPDKTERRRLRTRSVKQVIKDAKDFLGNSAELNDDEHPNGDAEDSTRMDDESREVSGLADKENRRKGRKRGRAYTSQATASEHDDGESEARSDSIVADGPRTRRQKVAAAQGPVERRYNLRRPRNVSKTAAVKTSSVSRKAKDGEDGGSEAQEENSRPRPLHSGVASDNGGSVNLMQTATGEEPKIYSTPVPNRMINSTVLNEEVNGTPDRHGGYGDEVEPRTGSQEDLSTREDVSEEGDGEEAEHPGEASIGKKLWKFLTT*

Click here to download the sequence:
Link to NCBI Protein BLAST