Transcript Information: S_Transcript_62707.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0292320919683
Replicate 21.2189386495865
Replicate 30.71325498665858
Condition 2: 8 Hour
Replicate 11.8851173761002
Replicate 21.1124123633013
Replicate 31.6487395937555
Condition 3: 24 Hour
Replicate 10.72413978421859
Replicate 21.5025731431833
Replicate 31.1147864930438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62707.p1 GENE.S_Transcript_62707~~S_Transcript_62707.p1 ORF type:5prime_partial len:181 (+),score=24.59,RVT_1|PF00078.23|3.9e-25 S_Transcript_62707:3-545(+)
AACGATCTCTCTTCGCAGAGTGCTTTTGTCGACGGTCGGCAAATATTGGACGCCGCTCTTGTGGCGAATGAGGTGGTGGATGATTCTCGGAGGTCGGGTTTCGAGGGGGTGGTCTTCAAGCTGGATTTTGAGAAGGCCAACGACAGAGTGAGTTGGTTCTTTCTTGATCGGGTTCTTCAACGGAAGGGGTTTGAAGTGAAATGGAGACAATGGGTGAGGGGATGCTTTTCTAATGCTGCGTTCTCTGTTATGGTGAATGGGGCACCGAGAGAGTGGTTCTCTTCTTCCAGGGGGTTACGGCAAGGAGATCCCTTGTCCCCTTTTCTGTTTACGTTGGTGGTGGATGTACTTAGTAGGCTTTTGGATAGGGCAGTGGATAGGGGATTGGTGGAGGGTTTTGTTGTGGGGAGGGAGGGTTTACAGGTTTCGCATTTGCTGTTTGCGGATGACACTATTTTATTCTTGAGGGCGGATTTGCTGAGGTTCAAGCATGTACTCACAATTTTACGAGGCTATTTCGGGGTTGCGTGTGAATCTTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62707.p1 GENE.S_Transcript_62707~~S_Transcript_62707.p1 ORF type:5prime_partial len:181 (+),score=24.59,RVT_1|PF00078.23|3.9e-25 S_Transcript_62707:3-545(+)
NDLSSQSAFVDGRQILDAALVANEVVDDSRRSGFEGVVFKLDFEKANDRVSWFFLDRVLQRKGFEVKWRQWVRGCFSNAAFSVMVNGAPREWFSSSRGLRQGDPLSPFLFTLVVDVLSRLLDRAVDRGLVEGFVVGREGLQVSHLLFADDTILFLRADLLRFKHVLTILRGYFGVACESW*

Click here to download the sequence:
Link to NCBI Protein BLAST