Transcript Information: S_Transcript_62711.p2


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7000658707667
Replicate 26.8044117326915
Replicate 37.3253858275984
Condition 2: 8 Hour
Replicate 116.94073062576
Replicate 219.653773571349
Replicate 316.235902615009
Condition 3: 24 Hour
Replicate 19.6974950075068
Replicate 29.7433208645979
Replicate 311.432421996712


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62711.p2 GENE.S_Transcript_62711~~S_Transcript_62711.p2 ORF type:complete len:214 (+),score=30.90,zf-RVT|PF13966.2|6.6e-20,zf-RVT|PF13966.2|7.1e+03 S_Transcript_62711:6085-6726(+)
ATGCAATGTCCCTCTCAGGCCTCATGGATGATAAAGAAAGTTTTCCACATGAGGAAGCATATAAACAATGTTACCCCTTGGGAAGGTATAGTAAAAGGGCAAAAATACAGCATCAAAGCAGCTTATATGAGAATGCAAGGTGACTACCCTAAGGTGGAATGGAGGGAATTGATTCTGAATAACATGGCCCCTGCAAAATCATTGTTTATTGTTTGGCTGGCTATGTTAGGGAGATTGAGAACAAAAGATAGACTCATTGTTTGGGGGATAAATGTAGACCCTCTTTGTGTCTTGTGTAGGAACGCAAAGGAAACTCACTCTCATCTATTCTTTGAGTGTAACTTTAGTAAACAGGTTTGGCAAAACATCCTAGACTGGATGAAGATCAGCAGGAATGTAGAGCATTGGGAGCAAGAAACCAGATGGATTATGCAGCAGGCTAAGGGGAAGCAGAACAAAGTTAAAATGTTGAAAATTTGTTTTGATGTTACCTTGCACTGTATATGGATGGAAAGAAACAGAAGAGTATTCCAGCAGCTTGGAAAGGATCCCCCTGAGATTACTAGACAGATTCAGTTCATGACATGCTGCAAAGGAATGGTTGACAAGAAGCTTGCTTCATTTATAGAGAACTTGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62711.p2 GENE.S_Transcript_62711~~S_Transcript_62711.p2 ORF type:complete len:214 (+),score=30.90,zf-RVT|PF13966.2|6.6e-20,zf-RVT|PF13966.2|7.1e+03 S_Transcript_62711:6085-6726(+)
MQCPSQASWMIKKVFHMRKHINNVTPWEGIVKGQKYSIKAAYMRMQGDYPKVEWRELILNNMAPAKSLFIVWLAMLGRLRTKDRLIVWGINVDPLCVLCRNAKETHSHLFFECNFSKQVWQNILDWMKISRNVEHWEQETRWIMQQAKGKQNKVKMLKICFDVTLHCIWMERNRRVFQQLGKDPPEITRQIQFMTCCKGMVDKKLASFIENLC*

Click here to download the sequence:
Link to NCBI Protein BLAST