Transcript Information: S_Transcript_62712.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value6.5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3449797934989
Replicate 24.5026101137785
Replicate 33.1365197421089
Condition 2: 8 Hour
Replicate 12.3211309188716
Replicate 25.7831989680926
Replicate 34.0601614485679
Condition 3: 24 Hour
Replicate 15.2011627358558
Replicate 25.7044967913255
Replicate 33.2599921339946


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62712.p1 GENE.S_Transcript_62712~~S_Transcript_62712.p1 ORF type:5prime_partial len:147 (+),score=13.31,zf-RVT|PF13966.2|2.3e-18 S_Transcript_62712:3-443(+)
GGGCACAAAAATAGTATCAAAGCTACATATATGCGAATGCAGGGAGACTACCCAAAGGTGGAATGGAGGAAACTGCTTCTGAATAACATGGCCCCTGCTAAATCATTATTCATTGTTTGGCTGGCTATGTTAGGGAGATTGAGAACTAAAGATAGTCTCATAGCTTGGGGGATAAATATAGATCCCATATGTGTCTTATGCAGGAACTCACAGGAAACTCGCTCTCATCTATTCTTTGAGTGTAGCTACAGCAAGCAGGTTTGGCAAATTATTATAGGCTGGATGAAGCTTAGCAAGAATATAGAGCAGTGGAAGCAAGAAACCAGATGGTTTACTCAACAGGCTAAGGGGAAGCAGATCAAAGCTAAAATGTTGAAGATGTGTTTTGTTGTTACCTTGTACTATATATGGTTGGAGAGAAACAAGAGAGTATTCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62712.p1 GENE.S_Transcript_62712~~S_Transcript_62712.p1 ORF type:5prime_partial len:147 (+),score=13.31,zf-RVT|PF13966.2|2.3e-18 S_Transcript_62712:3-443(+)
GHKNSIKATYMRMQGDYPKVEWRKLLLNNMAPAKSLFIVWLAMLGRLRTKDSLIAWGINIDPICVLCRNSQETRSHLFFECSYSKQVWQIIIGWMKLSKNIEQWKQETRWFTQQAKGKQIKAKMLKMCFVVTLYYIWLERNKRVFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST