Transcript Information: S_Transcript_62913.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97364638665294
Replicate 20
Replicate 30.82467519073011
Condition 2: 8 Hour
Replicate 11.8204601490235
Replicate 21.2731946380332
Replicate 32.3395442493272
Condition 3: 24 Hour
Replicate 10
Replicate 20.092129315351006
Replicate 32.0505727158631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62913.p1 GENE.S_Transcript_62913~~S_Transcript_62913.p1 ORF type:complete len:246 (+),score=41.69,PseudoU_synth_1|PF01416.16|2.5e-10 S_Transcript_62913:92-739(+)
ATGGAATACCAGGCAGACAAGGTGAAAGTTCATCATCACTATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTTTTGATGAATATGCTCCAGAAGCCAGTCCTCCCGAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGACTGGTTGAGAGATCTATTGGGGCATTCGTTGATGACAGGAAAGTTCAACAGCTGAAAGACAAGGGTTTACCCGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAGCTACTCATTGTAGGTATCACGTGCATTTCACCCGAATTTTTGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62913.p1 GENE.S_Transcript_62913~~S_Transcript_62913.p1 ORF type:complete len:246 (+),score=41.69,PseudoU_synth_1|PF01416.16|2.5e-10 S_Transcript_62913:92-739(+)
MEYQADKVKVHHHYAHTDPCKDRRWTAKECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTFDEYAPEASPPEEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGLVERSIGAFVDDRKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQLLIVGITCISPEFLC*

Click here to download the sequence:
Link to NCBI Protein BLAST