Transcript Information: S_Transcript_62915.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value1.9E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1582814429969
Replicate 24.4815041288702
Replicate 35.0223522370519
Condition 2: 8 Hour
Replicate 15.7597594383328
Replicate 26.1422709434964
Replicate 35.519281969147
Condition 3: 24 Hour
Replicate 15.0711336674594
Replicate 25.0588865125775
Replicate 33.884645232038


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62915.p1 GENE.S_Transcript_62915~~S_Transcript_62915.p1 ORF type:complete len:448 (+),score=80.01,PseudoU_synth_1|PF01416.16|4.2e-11,PseudoU_synth_1|PF01416.16|6e-05 S_Transcript_62915:92-1345(+)
ATGGAATACCAGGCAGACAAGGTGAAAGTTCATCATCACTATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTTTTGATGAATATGCTCCAGAAGCCAGTCCTCCCGAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGACTGGTTGAGAGATCTATTGGGGCATTCGTTGATGACAGGAAAGTTCAACAGCTGAAAGACAAGGGTTTACCCGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAGGTATCACGTGCATTTCACCCGAATTTTTGTGCTAAATGGAGGAGATATCTTTACGTTTTTCCATTGGCTGAAGGAGATCAAGGGAAACAGAGTGGTCAAAGACTAGAGATGAGAAATGCGTGTGTTGATGAAATTCATGGATGGAAGCATAATGAACCAGCTGGGGACAACACTATAGAAACGGAGGACTCACTTGATGACAAGGATAAGATTAACAGGGTGAAAAAACCAACGAGTTTCTCTGTTGCAAGAGTTGATCAACTATTGCGACATTTGGAAGGAAAATTGCTTTCTTACAGGATGTTTGCTCGAGACACCAAACCTTCGAGGAACACTGGTCCACCGACGGAGTGTTTTGTCTATCATTCTAGAGCAACTGAAGCCAGATTGCCATGCTCCAACAAGGACAAAGAAGATGCTGTCAAAGTTATGTGCATTGAGCTAGTAGCCAATCGTTTCTTACGGAGGATGGTTCGTGTGCTTGTTGCAACGGTAGTAAGGGAAGCCATCGCAGGCTCAGAAGACACCATTTTACTCAACCTGATGGAAGCTACTTGTCGACGGGCTACAGCACCTCCTGCGCCACCTGATGGTCTTTGCCTTGTAGATGTTGGTTATTCAGATTTTTATCCGAAAATATGTTTGATTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62915.p1 GENE.S_Transcript_62915~~S_Transcript_62915.p1 ORF type:complete len:448 (+),score=80.01,PseudoU_synth_1|PF01416.16|4.2e-11,PseudoU_synth_1|PF01416.16|6e-05 S_Transcript_62915:92-1345(+)
MEYQADKVKVHHHYAHTDPCKDRRWTAKECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTFDEYAPEASPPEEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGLVERSIGAFVDDRKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQVSRAFHPNFCAKWRRYLYVFPLAEGDQGKQSGQRLEMRNACVDEIHGWKHNEPAGDNTIETEDSLDDKDKINRVKKPTSFSVARVDQLLRHLEGKLLSYRMFARDTKPSRNTGPPTECFVYHSRATEARLPCSNKDKEDAVKVMCIELVANRFLRRMVRVLVATVVREAIAGSEDTILLNLMEATCRRATAPPAPPDGLCLVDVGYSDFYPKICLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST