Transcript Information: S_Transcript_62920.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value8E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5636377336642
Replicate 20.2024109133717
Replicate 30.84599706805507
Condition 2: 8 Hour
Replicate 11.5651662618079
Replicate 21.5393473834674
Replicate 32.6400361712592
Condition 3: 24 Hour
Replicate 11.7035000887161
Replicate 21.351511699507
Replicate 30.57848725699808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62920.p1 GENE.S_Transcript_62920~~S_Transcript_62920.p1 ORF type:3prime_partial len:218 (+),score=44.06,PseudoU_synth_1|PF01416.16|3.2e-07 S_Transcript_62920:92-652(+)
ATGGAATACCAGGCAGACAAGGTGAAAGTTCATCATCACTATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTGTTGATGAATATGCTCCAGAAGCTAGTCCTCCCAAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGGAAAGTTCAACAGCTGAAAGACAAGGGTTTACCCGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62920.p1 GENE.S_Transcript_62920~~S_Transcript_62920.p1 ORF type:3prime_partial len:218 (+),score=44.06,PseudoU_synth_1|PF01416.16|3.2e-07 S_Transcript_62920:92-652(+)
MEYQADKVKVHHHYAHTDPCKDRRWTAKECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTVDEYAPEASPPKEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQ

Click here to download the sequence:
Link to NCBI Protein BLAST