Transcript Information: S_Transcript_62925.p1


Annotated TAIR IDAT5G17610.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5804011-5805045 | Forward length=121
E-Value6.4E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.63234509684
Replicate 216.767720063711
Replicate 319.032903638276
Condition 2: 8 Hour
Replicate 122.007802807281
Replicate 222.90877300708
Replicate 319.098999454063
Condition 3: 24 Hour
Replicate 121.145847218895
Replicate 219.037601724132
Replicate 320.379411879334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62925.p1 GENE.S_Transcript_62925~~S_Transcript_62925.p1 ORF type:complete len:125 (+),score=30.20,DUF4787|PF16029.1|1.6e-22 S_Transcript_62925:280-654(+)
ATGGCTTTGAAACCTCAAGCTCAAGCATCCTTGTTGATATGGCTTGTTCTATCTTTGCAAATTATGTTACATAGCTCCATAGTCAATGCCAAATCTCGTCGCCCTGTTTCTGAAGTTGAAATAAAAATGAAGAAAGATGAGTGTTATGCTGACATTGAGAGTGGACTGTGGGGTTGGGATTGCAAATCTTCTATGGTTGCTAAGGAAAATTGCGCTTTGAAATGCCTTTCTCCTCAATGTTATGTGCTCATTTACGAGAGTGATCCTCTGGAAGAAGGAGAGAAGGATCTTGTTAGGAGTCAGGAATACAAGTACTGTATGCATAGGTCATCTCTGGGAGAGAGCCTTGAGGGCATTAGGGGTTCTTTTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62925.p1 GENE.S_Transcript_62925~~S_Transcript_62925.p1 ORF type:complete len:125 (+),score=30.20,DUF4787|PF16029.1|1.6e-22 S_Transcript_62925:280-654(+)
MALKPQAQASLLIWLVLSLQIMLHSSIVNAKSRRPVSEVEIKMKKDECYADIESGLWGWDCKSSMVAKENCALKCLSPQCYVLIYESDPLEEGEKDLVRSQEYKYCMHRSSLGESLEGIRGSFE*

Click here to download the sequence:
Link to NCBI Protein BLAST