Transcript Information: S_Transcript_62967.p1


Annotated TAIR IDAT1G02910.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)LPA1
Annotation TypeOrtholog
Chromosome Positionchr1:655749-658125 | Reverse length=453
E-Value5.3E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.929822678456
Replicate 224.120232234505
Replicate 328.066624158971
Condition 2: 8 Hour
Replicate 115.570919914097
Replicate 217.5334924855
Replicate 315.014138690017
Condition 3: 24 Hour
Replicate 124.488807881321
Replicate 225.676659543838
Replicate 325.172000666217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62967.p1 GENE.S_Transcript_62967~~S_Transcript_62967.p1 ORF type:complete len:504 (+),score=99.13,DUF3493|PF11998.4|1.1e-23,TPR_2|PF07719.13|5.7e-05,TPR_2|PF07719.13|0.047,TPR_11|PF13414.2|1.7e-10,TPR_1|PF00515.24|3.8e-05,TPR_1|PF00515.24|0.084,TPR_12|PF13424.2|6.5e-06,TPR_12|PF13424.2|3.4e+03 S_Transcript_62967:162-1514(+)
ATGAAGGTGGCTTCAATTACATGTCAACACCAAATACTCAGCTTCTCGAAAACTAAACTCCACAACCACCCAATTCTTGATAGAAACTGCAAAAGAAAATGGGTTTTCAACAACACTTCAATCACTCCCAAACGCCTTCATTTCTCTCTCATCACGTGTTCTTCTTCTTCCTCTTCTCCGTCCCCAGAAACTGCTACCCAGACAGCTGAGTCTTGTGTTAACCTGGGTTTGTCTCTCTTCTCCAAAGGACGGGTTAAAGACGCTTTAACACAATTTGATACAGCACTTACCTTAAATCCAAACCCTGCGGAAGCTCAAGCAGCACTCTACAATAAAGCATGTTGTCATGCTTACAGGGGGGAAGGAAAGAAAGCTGCTGATTGTTTGCGCACGGCCCTTAAAGAATATAACCTCAAATTTGGGACCATCCTCAATGATCCAGATTTAGCCTCCTTCAGAGCTTTACCAGAATACAGAGAATTACAAGAAGAGGCAAGACTTGGTGGAGAGGATATAGGCTATAGTTTCAGGAGAGACCTCAAACTTATTAGTGAAGTCCAAGCTCCTTTTCGTGGCATTAGGAGATTCTTTTACGTGGCTTTTACAGCAGCGGCTGGAATTGCAACTTTCTTCACAATACCCAGGTTGTTACGTGCAATTCAAGGTGGTGATGATGCTCCTGATCTGTTAGCGACTGCTGGAAATGCTGCCGTAAACATTGCAGGTGTTATCATTCTGGTGGCACTATTTTTATGGGAAAACAAGAAAGAAGAGGAACAGCTTGCACAAATATCTCGAAATGAAACTTTGTCGAGGTTACCACTACGACTTTCTACCAATCGGATAGTTGAACTTGTGCAGCTGCGAGACACTGTCAGACCGGTTATTCTAGCTGGCAAAAGGGAGAGTGTTTCTATGGCAATGCAAAAGGCGGAAAGGTTTAGAACTGAGCTCGTTAAAAGAGGTGTTTTGTTGATTCCTGTGATATGGGGCGAGGTTAAGGCAGCTCCCATGGAGAAGAAAGGTTTTGGGGGTTCTCAGAAGGCAGCTGCTGCTCTCCCCTCTATTGGAGATGAATTTGACAAACGGGCTCAGTCTATTACTGCCAAATCAAGGCTGCAAGCTGAGATACGATTCAAGGCTGAGGCGGTGTCCCCAGAAGAATGGGAAAGGTGGATAAAGGACCAACAACAATCTGAAGGAGTTACTCCTGGTGAGGATGTCTACATCATTATACGTCTAGATGGCCGGATTCGCAGATCAGGAAAAGGCATGCCTGACTGGCCATACTGGCCACAAATAGTGAACGAGCTACCTGCTATGGAGAACTTGCTGAGCCAGCTTGAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62967.p1 GENE.S_Transcript_62967~~S_Transcript_62967.p1 ORF type:complete len:504 (+),score=99.13,DUF3493|PF11998.4|1.1e-23,TPR_2|PF07719.13|5.7e-05,TPR_2|PF07719.13|0.047,TPR_11|PF13414.2|1.7e-10,TPR_1|PF00515.24|3.8e-05,TPR_1|PF00515.24|0.084,TPR_12|PF13424.2|6.5e-06,TPR_12|PF13424.2|3.4e+03 S_Transcript_62967:162-1514(+)
MKVASITCQHQILSFSKTKLHNHPILDRNCKRKWVFNNTSITPKRLHFSLITCSSSSSSPSPETATQTAESCVNLGLSLFSKGRVKDALTQFDTALTLNPNPAEAQAALYNKACCHAYRGEGKKAADCLRTALKEYNLKFGTILNDPDLASFRALPEYRELQEEARLGGEDIGYSFRRDLKLISEVQAPFRGIRRFFYVAFTAAAGIATFFTIPRLLRAIQGGDDAPDLLATAGNAAVNIAGVIILVALFLWENKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKRESVSMAMQKAERFRTELVKRGVLLIPVIWGEVKAAPMEKKGFGGSQKAAAALPSIGDEFDKRAQSITAKSRLQAEIRFKAEAVSPEEWERWIKDQQQSEGVTPGEDVYIIIRLDGRIRRSGKGMPDWPYWPQIVNELPAMENLLSQLEK*

Click here to download the sequence:
Link to NCBI Protein BLAST