Transcript Information: S_Transcript_62972.p2


Annotated TAIR IDAT1G02910.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)LPA1
Annotation TypeOrtholog
Chromosome Positionchr1:655749-658125 | Reverse length=453
E-Value6.2E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6151504103935
Replicate 20.63765287738482
Replicate 32.6651352721966
Condition 2: 8 Hour
Replicate 10.86287706485509
Replicate 20.64658522080135
Replicate 31.4785559032357
Condition 3: 24 Hour
Replicate 13.4093170765667
Replicate 22.8821032062407
Replicate 33.4990119405941


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62972.p2 GENE.S_Transcript_62972~~S_Transcript_62972.p2 ORF type:complete len:173 (+),score=22.18,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|0.01,TPR_1|PF00515.24|8.4e-06,TPR_1|PF00515.24|0.019,TPR_11|PF13414.2|2.5e-11,TPR_12|PF13424.2|9.5e-07 S_Transcript_62972:223-741(+)
ATGAAGGTGGCTTCAATTACATGTCAACACCAACTACTCAGCTTCTCGAAAACTGAACACCACAACCACCCAATTCTTAATATAAACAGCAAAAGAAAATGGGTTTTCAACAACACTTCAATCACTCCCAAACGCCTTCATTTCTCTCTCATCACGTGTTCTTCTTCTTCCTCTTCTCCGTCCCCAGAAACTGCTACCCAGACAGCTGAGTCTTGTGTTAACCTGGGTTTGTCTCTCTTCTCCAAAGGACGGGTTAAAGACGCTTTAACACAATTTGATACAGCACTTACCTTAAATCCAAACCCTGCGGAAGCTCAAGCAGCACTCTACAATAAAGCATGTTGTCATGCTTACAGGGGGGAAGGAAAGAAAGCTGCTGATTGTTTGCGCACGGCCCTTAAAGAATATAACCTCAAATTTGGGACCATCCTCAATGATCCAGATTTAGCCTCCTTCAGAGCTTTACCAGAATACAGAGAATTACAAGAAGAGGTTTTAGTGATCAACTTTTGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62972.p2 GENE.S_Transcript_62972~~S_Transcript_62972.p2 ORF type:complete len:173 (+),score=22.18,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|0.01,TPR_1|PF00515.24|8.4e-06,TPR_1|PF00515.24|0.019,TPR_11|PF13414.2|2.5e-11,TPR_12|PF13424.2|9.5e-07 S_Transcript_62972:223-741(+)
MKVASITCQHQLLSFSKTEHHNHPILNINSKRKWVFNNTSITPKRLHFSLITCSSSSSSPSPETATQTAESCVNLGLSLFSKGRVKDALTQFDTALTLNPNPAEAQAALYNKACCHAYRGEGKKAADCLRTALKEYNLKFGTILNDPDLASFRALPEYRELQEEVLVINFCD*

Click here to download the sequence:
Link to NCBI Protein BLAST