Transcript Information: S_Transcript_62976.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7843597726167
Replicate 25.8255680292314
Replicate 32.9011045524765
Condition 2: 8 Hour
Replicate 16.4695004332875
Replicate 26.1585426030708
Replicate 33.7123105379462
Condition 3: 24 Hour
Replicate 13.681721936617
Replicate 24.2017178765138
Replicate 34.2509063604128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_62976.p1 GENE.S_Transcript_62976~~S_Transcript_62976.p1 ORF type:3prime_partial len:178 (+),score=30.23,zf-C5HC2|PF02928.12|2.3e-14 S_Transcript_62976:2482-3012(+)
ATGATGTGGAAAGAAGCCTCTGGAAAGGATGGTATATTAGCAAAGTCTCTGAGGACCAGGATTAGGTCAGAGTCGAGATGCAGGGAATATTTGTTGTCTGGAAACCAGTCAAGAAAGATGGACAAGTCATTTGATGGGGTTGACCAGAAAAGGGAATGTGTCACATGTTATTATGATCTATTTTTATCTGCAGTGAGCTGTCCATGTAGCCCGGATAAGTTTTCATGTCTCAAGCATGCGAAGCATCTCTGTCCTTGCCCCTGGAATGTCAAAGTTTTTCTGTTCCGCTACCTGATTAGTGAGTTAAATATCCTTTTAGAAGCCGTGGAAGGCAAGTTGAGTGCCATCAGGAATTGGATGAAAGGTGGTCTTGGGGTTGCCCTCTATTGGGATAAGCACAATGAAGACCAACATGTGCCCTCTGTACCACCTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_62976.p1 GENE.S_Transcript_62976~~S_Transcript_62976.p1 ORF type:3prime_partial len:178 (+),score=30.23,zf-C5HC2|PF02928.12|2.3e-14 S_Transcript_62976:2482-3012(+)
MMWKEASGKDGILAKSLRTRIRSESRCREYLLSGNQSRKMDKSFDGVDQKRECVTCYYDLFLSAVSCPCSPDKFSCLKHAKHLCPCPWNVKVFLFRYLISELNILLEAVEGKLSAIRNWMKGGLGVALYWDKHNEDQHVPSVPPSVAEASNGRATSVAEASNGRATSVAEASNGRAT

Click here to download the sequence:
Link to NCBI Protein BLAST