Transcript Information: S_Transcript_6300.p1


Annotated TAIR IDAT2G32240.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13684614-13689330 | Reverse length=1333
E-Value5E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3900078960597
Replicate 24.9216992089841
Replicate 32.91615912433
Condition 2: 8 Hour
Replicate 12.952746351603
Replicate 22.9637919138099
Replicate 33.1518304578306
Condition 3: 24 Hour
Replicate 12.9126511320792
Replicate 24.1066051745177
Replicate 33.8156426151329


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6300.p1 GENE.S_Transcript_6300~~S_Transcript_6300.p1 ORF type:3prime_partial len:1170 (+),score=413.48,AAA_13|PF13166.2|0.00044,AAA_13|PF13166.2|22,AAA_13|PF13166.2|0.021,AAA_13|PF13166.2|1.1,AAA_13|PF13166.2|12,AAA_13|PF13166.2|0.34 S_Transcript_6300:156-3662(+)
ATGGAAGAAGAGACGCAAACGAGTACGGAGGTGCCAGTAAAGGTGGTCACAGAGAAACTTGAAACTACTGCTGATCCTGTTCAGGAAAATGGAAAGAAAGAGGAGAAAGAAAACTCTTTCGAAGATGGAGAATTCATTAAGGTCGACAGGGAAACGTTAGATGTGAAGGAAAACCCGCGTAGTGTTGAAGTTGCATCTGTAGAGGAAAGCAAGCCATCTGTTAGTGAATCTAGCAGGGAGTTACTTGAAGCACAGGAGAAGATTAGTGAACTTGAGACTGAATTGAAAAGAGTGGCAACAGCATTAAAGGATTCTGAATCCCAGAATGTGAAGCTGAAAGACGAGGTTTTATTGACAGAAGAAAAGCTTGAAGGAAGTGGAAAGAAGTACGCGGAGCTTGAGCAAGATCACAAGAAATTGCAGGAACAGATGGTAGATGCCGAGAGCAACTTCAAGGAAAATCTGAAGACGATGGAGGAGGCATTGGAAGATCATGCTTCAAAGCACAAGGAACTTGCTGGCATTAAGGAAACGTTTGACAGTCTTAATCTGGAGTCCGAGTGCTCAAAGAAGAAGGTACAGGAGTTGGAGCAAGAGTTGCAATCTCGTACAGCTGAATTGGAGGATCTGATGAAGTCATCTCATTCCAAAATTGAGGATGCTGAGAAAAGGGTCACTGATCTGGAATCATTACTGGAAGAAAAGAAGCAGAAAGTCGGAGAACTTGAAGAGCAAATAAACTCGCTGGAGTCTAAATGTGCGGATGCACAAGCAGAATCAAAGAAGCATTTAGGCATGGTGTCTGAACTCAGTGCAGAAATTGAGAAGTTCAGGTCATCGATGTTAGCCTTTGAGAGTGCCCTGCAGACAGCAAGTGAGAAAGAAATTGCTCTGATGGAGTCTTTAGATGCAGTGAAAGAGGAGAAGAAAGTTTCAGAGGAAGCGCTGGAGAGTTCCGTCAAAAAGTTGCAGGAAGCTGAAAGTCTACTTGAAGCATTGCGCGGTGAATTGTCTGTTACACAAGGAAAATTGGAGGGCATTGAAAATGATCTGAAGGCTTCTGGATTAAGAGAAACTGAGATTATAGAGAAGCTGAAATCTGCCGAAAATCAGTTAGAGGAGCAAGGGCGAGCAATTGAAGAAGCAACAGTGAGGAAGACAGAGCTTGAAACTTTGCATGAATCATCCACAAGGGGTTTCGAGTTGAAAATGCAAGAAGCAATAGCAAACTTCAGCAACAAAGAATCTGAGGCGAATTCATTGTCTGAGAAACTTAAGATTCTCGAAGATAAAGTACAAGCTTATGAAGAACAGATAGCCGAAGCAGCACAGAAGGCTGCATCTTTGACAGAAGAACTGCATCAGAGTACTTCTAAGGTAGCTTCCTTGGAAAGCTCGAATGAAGAGCTCAAGAAAACAATCGCAGATGCTGAAGGTGAAGTTGCACAGTCACTATCGGAGAATGAGCTTCTGGTTGAAACAAACTCACAGCTGAAGAACAAGGTTAGCGAGCTACAGGAATTGCTGGATTCTGTTAATGGTGAAAAGGAAACCACTGCTGAACAGCTTGCTTCTCACATGAATACCATCGCTGAGCTAGCAGACAAGCACTCGAGATCATTTGAACTCCACTCTGCAACAGAAGCTCGTCTTTTGCAAGCTGAGGAGCAGCTGAAAGAAACAACTGGTAAATTATCAGAGAAAGAATCGGAAGTTAAGGAGTTGAGTGAACGACTTAGTTCCCTTGAAATCCAGGTGAAACAACATGAGGAGGAGGCCCGTGAAGCTTCAGGGATTGCGGAATCTAGAAAAGTTGAGTTAGAACAGTTACAAGAGACTGTTGCTAAATTAGCTGATAAAGAGGTTGAAGTGAAGGATCTGAATGAGCGACTTATAGCTCTTGAAGGCCAAGTAATAACGTATGAGGAGGAAGCCCGTGAAGCAGCTAAGACTGCCGAATCTAGAAAAGCTGAAATTCAAGAGACAGCTGACAAATTAACCCAGAAAGAGCTCGAAGTGAAGCAACTGAATGAGAGACTTGCTGCTCTTGAAGACCAACTGAAAGTAGCTGACGAAAATGCCCATGAAGTTTCAGGGGTTGCTGAAGCTAGAAAAATTGAAATTGGGGAGTTGGTTGACCAGTTGAAAGAGACTGTTCAGAAAATAGCACAGAAAGAGCTTGAAGTTAAAGAATTGAATGATAGAGTTACTTCCCTTGAGGGGCAAGTAAAAGTGTACAAAGAGGAGGCCCATGAAGCATCTACGATGGCTGTATCTAGGAAAGTCGAATTTGAAGAGACGATCGAGAAGCTAAGTCAAAACGAGCTGGAAGTGAAGGATCTAATTGAAAAGCTTACTTCCCTTGAAGGCCTAATAAAGACACACCAGGAGGAGGCCCATGAAGCCTCTGGGATTGCTGAATCGAGAAAACTTGAAATCGAACAGTTGCAAAGGATAGTGGAAAAATTAGCTCAGAGGGAATTGGAATTGGAGGCCCTTGAAAACCAGCTCAAAACACACCAGGAAGAGGCACGTGAGGCGTCTGGGATTGCTGATTCGAGGAAACTTGAAATTGAAGAAATTTCTAAGAAATTACAGGACCAGACGAAAATGATTGAGGAGCTACAGCTCAATTTGGCTCAAGTTGAGACACGCAATGAAGCCTTAGCTGAGGCAAATATGAAGCTCACCCAGGATCTGGCTCTGGCCGAAACTGAACAGAGTGATCTCCATACAAAACTCTCGCATGCTCTTGTTGAGAAGGATGAAATCGCTGCCCAGTGTGACCTGTCAAAGAAGACTGTTGAGGATTTAACACAGGAGCTCAATTCTGAGAAACAAAGGCTTCAGTCCGAGTCATCTGCAATTCTGGAGGAGAGCAGCCAGCTTCAAGAAGCCAAGAAAGAACTTCAAGCTGTCATTATCCAACTTGAGGAGCAGCTGAAAGGATATAAAGGAAACGAAGATACTTTAAGATCTGAGTTGGAAAATCTTAAGGTTCAAATAACAGAGAAATCAGCTCTGCAGGAAAAGTTGAAGGCACTTGAAGAACAATATCAAACATCCGAGGCTCGATTGAAAGAAGAGGTTAAAAATCTCCAAACAACTGCAACTTCAAGAGAGGCTGATTTGACATCACAATTGGAAGATCATGTACGGAAAGTCCAAGATAGAGATTTATTGAATGAAAGGGTTCTGCATCTTGAACAAGAGTTGCAGCATGCACAAGCTACCGTAACTAAGCTGAAAGAAGAAAGTTCAGCAAAGGTTTCTGAACTGGAAGCTGCAAGAAGTCATGCCTCTGAAGAGCTTGGGGCCAAAAACAAAGAAGTCACATATTTGGGGAAGAAAATCGAGGAACTTGAGCAGAAACTTCTTACTGCTGAATCAAAATCCAAACAAAAGGTTGATGAAAGCAATACTGGTGCACAGAAGGGTGAAACAGAAATAAGGTCCAGAGATATTGGTTTAAATCTTTCAAGCCCAGCAAAACGAAAGAGCAAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6300.p1 GENE.S_Transcript_6300~~S_Transcript_6300.p1 ORF type:3prime_partial len:1170 (+),score=413.48,AAA_13|PF13166.2|0.00044,AAA_13|PF13166.2|22,AAA_13|PF13166.2|0.021,AAA_13|PF13166.2|1.1,AAA_13|PF13166.2|12,AAA_13|PF13166.2|0.34 S_Transcript_6300:156-3662(+)
MEEETQTSTEVPVKVVTEKLETTADPVQENGKKEEKENSFEDGEFIKVDRETLDVKENPRSVEVASVEESKPSVSESSRELLEAQEKISELETELKRVATALKDSESQNVKLKDEVLLTEEKLEGSGKKYAELEQDHKKLQEQMVDAESNFKENLKTMEEALEDHASKHKELAGIKETFDSLNLESECSKKKVQELEQELQSRTAELEDLMKSSHSKIEDAEKRVTDLESLLEEKKQKVGELEEQINSLESKCADAQAESKKHLGMVSELSAEIEKFRSSMLAFESALQTASEKEIALMESLDAVKEEKKVSEEALESSVKKLQEAESLLEALRGELSVTQGKLEGIENDLKASGLRETEIIEKLKSAENQLEEQGRAIEEATVRKTELETLHESSTRGFELKMQEAIANFSNKESEANSLSEKLKILEDKVQAYEEQIAEAAQKAASLTEELHQSTSKVASLESSNEELKKTIADAEGEVAQSLSENELLVETNSQLKNKVSELQELLDSVNGEKETTAEQLASHMNTIAELADKHSRSFELHSATEARLLQAEEQLKETTGKLSEKESEVKELSERLSSLEIQVKQHEEEAREASGIAESRKVELEQLQETVAKLADKEVEVKDLNERLIALEGQVITYEEEAREAAKTAESRKAEIQETADKLTQKELEVKQLNERLAALEDQLKVADENAHEVSGVAEARKIEIGELVDQLKETVQKIAQKELEVKELNDRVTSLEGQVKVYKEEAHEASTMAVSRKVEFEETIEKLSQNELEVKDLIEKLTSLEGLIKTHQEEAHEASGIAESRKLEIEQLQRIVEKLAQRELELEALENQLKTHQEEAREASGIADSRKLEIEEISKKLQDQTKMIEELQLNLAQVETRNEALAEANMKLTQDLALAETEQSDLHTKLSHALVEKDEIAAQCDLSKKTVEDLTQELNSEKQRLQSESSAILEESSQLQEAKKELQAVIIQLEEQLKGYKGNEDTLRSELENLKVQITEKSALQEKLKALEEQYQTSEARLKEEVKNLQTTATSREADLTSQLEDHVRKVQDRDLLNERVLHLEQELQHAQATVTKLKEESSAKVSELEAARSHASEELGAKNKEVTYLGKKIEELEQKLLTAESKSKQKVDESNTGAQKGETEIRSRDIGLNLSSPAKRKSKK

Click here to download the sequence:
Link to NCBI Protein BLAST